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11-2293-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4012537 [Map]; Strand: c
      • AT3G12630.1 - [+] show detail - A20/AN1-like zinc finger family protein
        Distance: -71; Region: promoter
    Flanking Genome Sequence: 11-2293-1 - 5-prime edge 
    CTCATAGAGA GACGCAGTTT CCATCTCTCT TATCATCTCT CCTTCCACCA 
    TCCCCACTTT CTCGTCTTCT GGTGGATTTA CGTTAATACC CTCATCGCTT 
    TTTTGGAATT ACCAGAGAGG ATTAAATATG CATTTCAATG ATTCTAGAAT 
    GGCTTATGAC GCCATACAGC GGACAACAAC ATGTTTCTCT TTCTCACATT 
    TTTGCTTTTT TGGGTGTATT TTCTGATTTT TCTTTGAGTA TACTCTAATT 
    TATTAGTATC ATGACTTTTA TAAACTGAGA TATCAAAGAA GGGTGAGGAA 
    AATCGCTGGA ATATGGGCCA ACTTGTTTAT TTATGTTTCT CTCCCAACAA 
    AAAAATCACC AAAGAAAAGT AATACCATAA TCATATATAT ATCTAGAGGT 
    GTTATTGTGT TAACTAGTTT CGAACACCTG TATGTTTATG TTTGGTTCGA 
    CTTCGGACAT GTTANATTTT TATTTTTTAC TTTAGGGAAA AACAAAAAGA 
    AAGAGATTTT GGGGGTTAAA ACTGTCACAC AAAAAAAACG ACCTGTGAGG 
    TTGTAAAGCT ACGCGTACAA CATGTCAACA TGCCAATTTG CAGACTTTAT 
    TTTTTTCCAT GTTTTTGCGT NAATCANNAG TATTTNATTT GCTCTTTGGC 
    TTGNAGGTTG AAGCTACCAN CCCGGGCCGN NNACCACCGN NCCCCTNAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4012653 [Map]; Strand: c
      • AT3G12630.1 - [+] show detail - A20/AN1-like zinc finger family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-2293-1 - 3-prime edge 
    TCTATGAGGC CCATATTCCA TTCTTACCTC TCTCTACCTC TCTATCTCTC 
    TCTCCTCATA ATCGATCCGT AAACTCGCCG GAGGAGCAGG GAGATTCAAT 
    AAGACGATGG CTCAGAGAAC GGAGAAGGAA GAGACCGAGT TCAAAGTTCT 
    CGAAACCTTG ACGACAACAA CAACGACGTT ATGTACCAAT AACTGCGGCG 
    TTACAGCGAA TCCTGCGACG AACAACATGT GTCAGAAATG TTTCAACGCA 
    TCTCTCGTCT CGGCGGCCGC AGGTGTTGTT GAATCAGGTT CGATCTTGAA 
    GAGATCGGCT AGATC

AT3G12630.1

Model type
Protein coding
Short Description
A20/AN1-like zinc finger family protein
Computational Description
A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink).
Link
InterPro Scan - TAIR