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11-2800-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 400400 [Map]; Strand: c
      • AT5G02035.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
      • AT5G02040.1 - [+] show detail - prenylated RAB acceptor 1.A1
        Distance: -499; Region: promoter
      • AT5G02040.2 - [+] show detail - prenylated RAB acceptor 1.A1
        Distance: -499; Region: promoter
    Flanking Genome Sequence: 11-2800-1 - 3-prime edge 
    CATAAAACAA CAACAACACG AAGAAGAAGA TGAAGGTACT TGATGATGAA 
    CGGGTAATCT GCATCCTGAG GTTTAAAACC AATTAAGCAT ATACATATGC 
    GAATGTATAG TTTTTAATCC TCGGGATACA GTTTACCTCT TCCTTACTCA 
    AGAAAACACT TAGCTTTAAC GGTTTTGGAG AAAGAAGAAG CATCGAATTA 
    AATCCATTTG AAACAGGTTA GTTATCTTAG TGAAGAATAT ATCCATCAAT 
    CATAATTTGG TCTAGTCATT CGAAGTGGGA TATGATTTGA TACATATAGT 
    CTAAAATATG ATTTTATGCC AGTAATATTT TGTTTTCCCT GTCCCCTACC 
    TATATCTAGA GCTTGAGATC CTCCTTTTAA AACTTTTAGA TGATTAATCG 
    TTTTACAAAT CATAGTCCCA GACTTTCGTT CCAATCTAGA TCGGTTTAGA 
    TGCGTTTTGT TTTGGAATTT ATACAACGAA AACCAAAGTT TAGATTAAAA 
    GATTCGAAAA CCGGATTACA TAAAATCTGG TCCAGGACCC CTTTGGTTAA 
    CGAAAACCAG ACTAAAGGGC AGAAACGTCA TTTGACAAAA AGACGGATGA 
    TTCTCTCCTT CCTCTTTCCC CAATGCAAAG AAAAAGCATT ATAGACTTTT 
    CAAGTTTTCC GATATAAGCA CGAAATCGCT GTTTCTCTCT TCGACGAAGC 
    T

AT5G02035.1

Model type
miRNA
Link
InterPro Scan - TAIR

AT5G02040.1

Model type
Protein coding
Short Description
prenylated RAB acceptor 1.A1
Computational Description
prenylated RAB acceptor 1.A1 (PRA1.A1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11402.2); Has 236 Blast hits to 236 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 12; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02040.2

Model type
Protein coding
Short Description
prenylated RAB acceptor 1.A1
Computational Description
prenylated RAB acceptor 1.A1 (PRA1.A1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11402.2); Has 236 Blast hits to 236 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 12; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR