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11-4734-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23400682 [Map]; Strand: c
      • AT3G63350.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4734-1 - 5-prime edge 
    CTTCCCAAAA CCCGTCGTCA AGCTCCCTCT CCACACCATC AGTCCGTTGC 
    CGTCCATATC CTTGCATCTC AAGCGCCAGA GCCTCCAGCT CCGACAGGTG 
    CTCCACCTCT TCCATTTTGA TCAAGCCAGC CTGATCAATC ATCGCGGCCT 
    CCTCTCGGTC TCTCTTCTGC TCGAAAATCT GCTGCAGAAG GGAAGGATTC 
    TCCACCGCAC GCATCAAGAA GGACATCATA TGCCTCTGTT TCTTCTCTGC 
    TCCATTAATC CTCTGCTCCA TGGCTTGGAC GTAGCCTCTC GCTCTTTGCT 
    CCTCCTGTCT GAGCGTCGAG ATCTCCATCA TTAGGACATG CCTCTCTTCT 
    CGGAGCTGCG GAAGCTCGAC GCCTGGGTCA TGAGCCTCGG GCTGAGACTG 
    AGAGTAGTTA AGCGAAGGAG GGGAAGAAGA GGAGGTTCGT CGCTTGATGC 
    TTTTGAGAAG GTCCCTCTGA CCCATCAAGA AACCTTCATT CATAAACTCC 
    CATCTCTCTG CCTCGATCTT TCTGAATCCC TGCAGATAAA TAAGTAATCG 
    AATATCATAA TATAAGTTTT TTTTTGGTTT GCGACGTAAA CATGTTNTNT 
    NTAACAGACN AAGAACCTGC CACTCTANTG CGCTGNAAAA NGAAAGCAAC 
    ATTATCTTCA ATTTTANATT TTGGNNGGAT GGAATAANTG GAATATTTTA 
    TNGNNAGGNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23400807 [Map]; Strand: c
      • AT3G63350.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4734-1 - 3-prime edge 
    GTTACTCATG AACAATGAAA AGTCCGACGA AGAAGAGGCG AATGTGAAGC 
    AAGATTAGGT TTTATGGGTT CATGTCCGAA AAAGAAAAGT ACAAGTATCG 
    ATCAATCAAA GCTAATGAAG ACTGAGAACC AACAAAATGA ACTATGTGTA 
    TAATATATAG GGTTACATTA CACCACAACG TCTTCTGTTC CATTTTTTAG 
    AATTTTTGGT TCCTTTTATT TGATTTTTAA TAGCTTTTAT GTATAATTTC 
    TCTTTATTTA GTACTGTAGT GTATGCTATG GCTTTTAGAA TAAAATTTCA 
    ATAATAGTGT GTAAAAATGA CAAAACATTT TATCGTTTCT TTTTAAAAAT 
    ACTTTGCTTT TAGCTTGAAA ATCTTATAAA ATGGAATATA TAAAAGTATT 
    AATTATCAGA AACAAANGAC GTAATATTAT TTTGCGTGTT TTTAANAAAC 
    TTATTCTTAG GTGTAAAACG GGCTTAAATA CTGCTTGAAC AAGAATATGT 
    GATGAAATCA GGAGCAGCCG GGCTTGCGAT TGCGACAGAG GCAGCGGTGG 
    GGGTCAGAGA CGCAAACGCC GCTAATGGCT CCTTCGTACT TGCACAAGTT 
    GTCGCAAAGG CCTTCTNCCG CACCTTTTAA CCAGCACGGG AAGTTTTGGT 
    AGAAGCT

AT3G63350.1

Model type
Protein coding
Short Description
winged-helix DNA-binding transcription factor family protein
Curator Summary
member of Heat Stress Transcription Factor (Hsf) family
Computational Description
AT-HSFA7B; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root, pedicel, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A7A (TAIR:AT3G51910.1); Has 2113 Blast hits to 2100 proteins in 228 species: Archae - 0; Bacteria - 6; Metazoa - 325; Fungi - 481; Plants - 785; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).
Link
InterPro Scan - TAIR