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11-4791-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 610933 [Map]; Strand: w
      • AT5G02700.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4791-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TAAGTAGATG GTGTGCTAGA GTATGTCAGT CTCAAATAAT
    AGATGTGTGG CGCAACAATC GCAACTGGTC CTGTGCGGCG ATATTGCCGA
    TTTATATCCA ATCTCCTCAG ATTCGGTGAT TTACTCAGAT CAAGACGCTC
    AAGTAGTCTG CATGTATCCA GTGTCAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 610924 [Map]; Strand: w
      • AT5G02700.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4791-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTGATTCT 
    ACTATAGTGG ATGTCTCCTC TTTGAGCGAA GCTAACCTTA CCATTATCAG
    TAGCCTACTC TCTCCCTTGA CTGCTGATGG TTATCAAACC ATGGCGCTGG
    AGATGCTATC AAAATTTCAC AACGTTAAGA GGCTTACNTG TTGGGGAAAC
    CCTTCTTCAG GTATACTCTA AAGTCTAAAA CCTGTAGAAC TCTTATTTGG
    TTAATAATGT TTCTTTGATG GTTTAGAACG CCAACTTGCT AAGTGGGTTT
    CTAGCAAACA TGACCTTTTA ATTTCATCTC GTTTTGTCAG ATTCTATCTC
    TCGCCGAGCT CCGCGGTGTT CCTTTCCCAA CGCTCAAGGT CCAAACTTTG
    ACTGTTAAAA CGGAGTTCGT TCGATCTGTA ATCCCTGGTA TATCAAGGTT
    ACTACAGAAT T

AT5G02700.1

Model type
Protein coding
Short Description
F-box/RNI-like superfamily protein
Computational Description
F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G28410.1); Has 2196 Blast hits to 2168 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 2186; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR