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11-5171-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5195088 [Map]; Strand: w
      • AT1G15100.1 - [+] show detail - RING-H2 finger A2A
        Distance: -885; Region: promoter
    Flanking Genome Sequence: 11-5171-1 - 5-prime edge 
    TCGCTAACTT GTTGTCTCAC CACCTTCCAT ATTTTATATG TTTCGGACCC 
    CCCAATAATC ATGTCATATC TACGGTTTCT ACCTTATTAA AATATACTCC 
    AAAATTTTAA AATAAGATAG CAAGCAACTA CNTTAAACAG CGGACTAAAC 
    AACATCAGAA TTTTCGGGAA TATTATTTGT AAATTGGTTA AAGCATAAGC 
    TACAAATTTT CTTATATATC ATTTATTTGG GGAAATGGTT AAATTTTTAT 
    TTTCAAAATT AGTATTTCTA TCTTTTACCA ACTAATAAAA TGGTATATTG 
    GTATATATTC TTGTTTTTTT TAGAGGTCAC AATAAAATAA GTGAAAAGTG 
    CGCATCTACA GTAATTTGAA TCGAACATTA CTTTTAATGT ACATGATGAA 
    TAACAAAGGA TAAACATGAC CATCATGAAG GAAACATAAA CGAAAGAGTG 
    AAGGATAAGT AACATTTAGT CAGTATTATA AAAATGGTAA ACGGCGCTGT 
    CAACGTATTA ATTTTGCATA ATATATAATG ATAAGTTTGG GTTTATACTT 
    ATATTTAAAT AGAGAAAGTG GGAGAAAAGA AGTCTCTATT TCGCCGTCCA 
    AAAGATATGA NAATCCACCG ACTGATAAAA AAAAAACAAA ANAGGTGGGG 
    ATTAAAAAAG TGGATTAACC CTTTATTTAA GCCAAANACC AAACCCTTTC 
    CCCTNGTTTT ATTN

AT1G15100.1

Model type
Protein coding
Short Description
RING-H2 finger A2A
Curator Summary
Encodes a putative RING-H2 finger protein RHA2a.
Computational Description
RING-H2 finger A2A (RHA2A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: response to salt stress, positive regulation of abscisic acid mediated signaling pathway, regulation of response to osmotic stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger protein 2B (TAIR:AT2G01150.1); Has 8620 Blast hits to 8597 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 672; Plants - 4576; Viruses - 12; Other Eukaryotes - 1166 (source: NCBI BLink).
Link
InterPro Scan - TAIR