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11-6398-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 617400 [Map]; Strand: w
      • AT3G02832.1 - [+] show detail
        Distance: 78; Region: intergenic
      • AT3G02840.1 - [+] show detail - ARM repeat superfamily protein
        Distance: -1009; Region: intergenic
    Flanking Genome Sequence: 11-6398-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC TCTGTGGATC GTTTTAATCG AAAATAATAT 
    TGAACGTTAC ATGTTATTGG GTGAAAATTC GTATTTATCA GATTTTTGGT 
    TTTGATCGAA TCTTCGTGTG GTTTATCTTA GATACTCGAA CTTTTAAAGC 
    AGTGTATGAA TCTACGCGTA AAATATTTAA TGTATTGAAG TAATATTAGA 
    AAAACAATGA CGCGGGGAAA AGTAAACAAA CACGGACCCG ACGACGGATA 
    AGCGACCAAG CCCGAGTCGC ATCGTCTTGG TCTTAAGTCT TTCCCTACTC 
    GTTTTATCAT TTTCTTAAAC TAAAAACTAA TTTAATCACT CTTAATTATT 
    TACTTTTTTC TTTTAATTCA ACTATGACTA ATTCTTATTC ACAGAATGAG 
    TCTCACATGC CTACTCGTCG TACTCGACTC CAGTCCAAAT GTTCCCATAC 
    TTGTAATCTA TACTACATAT ATTATACGTC ATCGTCATAT ATATACAAGA 
    CTCAATATAT AACGTCCAAA TTAATCAAAG ATTTAACATG ATCGGGAACC 
    AATATCTAAT CATCGATTAG ATATATTTAA GTCTAGTAAC TAATTAGTAT 
    ATTTTCTACA AATTGTTTAA TTAAACATAT AGTATACAGT TGGTAAAGGG 
    GAAACACGCG TAATCTATAT GTATATATTA ATAATATATA GTTCTTGGNA 
    TGATCTTCTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 617399 [Map]; Strand: w
      • AT3G02832.1 - [+] show detail
        Distance: 77; Region: intergenic
      • AT3G02840.1 - [+] show detail - ARM repeat superfamily protein
        Distance: -1010; Region: intergenic
    Flanking Genome Sequence: 11-6398-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AGAAAGTTAT TTTCATTTAA AAAAAATCAA ACCAAAACCG GATTCATTAC 
    ATCCCGGTTC AGTTTACCAC GAAATTTAAC CGCAGATAGG TAAAACATAA 
    GCCAGTTGGT TCAATCATCG TAGCCATGAA TT

AT3G02832.1

Model type
Other RNA
Link
InterPro Scan - TAIR

AT3G02840.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to other organism, response to ozone; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G37490.1); Has 423 Blast hits to 423 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 422; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR