1. Home
  2. Mutant Lines
  3. 11-6789-1

11-6789-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20037932 [Map]; Strand: w
      • AT3G54100.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G54110.1 - [+] show detail - plant uncoupling mitochondrial protein 1
        Distance: -748; Region: promoter
    Flanking Genome Sequence: 11-6789-1 - 5-prime edge 
    CCGACGACTG ACATATCGTC GCCGGTGAAA TAGGGAATTG AAGATTAGAC 
    AAAAGGAAAG AGATAGAGAA AGAAGAGAGA GGGTTGATTT TTAGGTTTTG 
    GAGGAAGTAG TTGACCATGT ATGTATCTTC TGGTATAGTC ACCGTCACCG 
    TGAAATTCGC CGAAGCTGAG TTTTTGTTTT CAGAATTTTT TATATTCGCC 
    AGTGTGTCTA ATTATATATT TATGTGACTG TTCTAATCAT TTTTTTTGTT 
    TAGGTTTTAC ATTTTTTATG TATGATGTGA ATGGATAATT TTCAAAAGTT 
    TGTCACGTTT GTAGCACATC TTTTTATATG AATAGTTTTT TGGATGTTAG 
    TGTATAAATA TAATTNGNCA TATCGTTTAG ATTAAACAAA TNTNGGCAAA 
    ANAGTGATTA ACGTGTTCTT TTGAAATAGC TAAGAGATAC TAACCTATGA 
    TGATTAAGTT TATGATAATT AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20037816 [Map]; Strand: w
      • AT3G54100.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G54110.1 - [+] show detail - plant uncoupling mitochondrial protein 1
        Distance: -864; Region: promoter
    Flanking Genome Sequence: 11-6789-1 - 3-prime edge 
    GTCGTCGGAG CGATTAACCC CGTACCTATT GCACCCACCA CTCGCCGCCG 
    TGTTGGCGAT TCTCTAGACG TTATCTCCGA ACGACCCTCG AATT

AT3G54100.1

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 847 Blast hits to 824 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G54110.1

Model type
Protein coding
Short Description
plant uncoupling mitochondrial protein 1
Curator Summary
Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.
Computational Description
plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink).
Link
InterPro Scan - TAIR