Home
Mutant Lines
12-0106-1

12-0106-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 30335828 [Map]; Strand: c
  - AT1G80710.1 - [+] show detail - DROUGHT SENSITIVE 1
    Distance: 0; Region: exon1 (5UTR)
  - AT1G80720.1 - [+] show detail - Mitochondrial glycoprotein family protein
    Distance: -310; Region: promoter
Flanking Genome Sequence: 12-0106-1 - 5-prime edge
```
CTTCTAGGTC TTCTTTCAGT TTTGGTGTGA AGAAAAAAAT CTCTCCTTTT 
TTGTTTGTGT GTAAAGAGAA AAAATCTCAA TTTTCTCAAG CATCAATCAA 
TCAATGGCGA CGGAGTACGA GCCGGAAGAG ATTGGAGAAC ATAAGACGGA 
ACGATGAGAT GTTGGCTGCT CTCAATGTCC GCGCCAAAGC T
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 30335944 [Map]; Strand: c
- AT1G80710.1 - [+] show detail - DROUGHT SENSITIVE 1
  Distance: -73; Region: promoter
- AT1G80720.1 - [+] show detail - Mitochondrial glycoprotein family protein
  Distance: -194; Region: promoter

CCTAGAAGAA AAAGAAAAAA GCTAACAACA TTTGATGGGT CGGAAATAGG 
CGGCAGAATA ACAACTGCCG CCAAAAAAAT AAAAAAACGA AAATATATAA 
TTACACATTT ACACCAAAGT GTGATCTAAA TNGAACGGTG CAGATTAGTT 
TAACATTTAT CCCAAATTTT AAGAACCGTN CGATGGAGCA TCTTAATGAC 
TTAAACCCTA AAAGAAGAAA AACCCCAATC GAGCTCTGTC AATGGCTCGC 
TTCGTCAGAT GTCTGAGAAG AACACTCTTT TCTAATTCGT CTCCTTCTAT 
TGCTCACCGG AGCCCTAGGA TTGGTTTGCC CACGAATCTA AATCCTAAAA 
TTTTAATCAG CCGCANATGT CTGAGCTCCG GGAGTTACGT CTCANAAATG 
CAGAAATCAG CTTTCCAGGG CAACATTTTG CGACTGATCC GTAATGAGAT 
TGAGTACGAA CTCGATCACT CGCCTCCTCT TCAGGTTCTC TATGAATCTC 
TTTTTTTTTG GTTCTATATT CTTTAAGCCT TCTAGGAATC TGGTTTTGGA 
ATAGNGTTAT TGATCAATTG ATTGGTTTGG CATGANAATC ATATAAATGT 
NGATCTGTTA GGGNAACTTA GGNNGATACA ATTNGNAAAC TATTGGATGA 
ANAAATGTTC ACATNTTTGC ATGGCCTNTN TGTTTNGGAT TTGCAAGTTT 
TTTTTTTTTG GGGGGNNGGG GGNCCCNTTN TNANCCCNNC NNTGTNNGGG 
NA

AT1G80710.1

Model type: Protein coding
Short Description: DROUGHT SENSITIVE 1
Curator Summary: Encodes a WD
Computational Description: DROUGHT SENSITIVE 1 (DRS1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: damaged DNA binding 2 (TAIR:AT5G58760.1); Has 13978 Blast hits to 9952 proteins in 465 species: Archae - 46; Bacteria - 2948; Metazoa - 4636; Fungi - 3015; Plants - 1520; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80720.1

Model type: Protein coding
Short Description: Mitochondrial glycoprotein family protein
Computational Description: Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G15870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR