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12-0321-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3045117 [Map]; Strand: w
      • AT3G09920.3 - [+] show detail - phosphatidyl inositol monophosphate 5 kinase
        Distance: -198; Region: promoter
      • AT3G09920.2 - [+] show detail - phosphatidyl inositol monophosphate 5 kinase
        Distance: -349; Region: promoter
    Flanking Genome Sequence: 12-0321-1 - 3-prime edge
    ATGTAATGTT TCCCTTCACC GGCCAAGCAG GTCAACATCT CTACCTTCTA 
    AACACACATC AATTTTTTGT TGAATATTAT ATTTCATCGA TTAAACAACT
    AAACTTATAT TTGAAAAAAT ATCTCAAACC ACTCGGATAA TAGAAAGATC
    AGAGTATTGA TAATTATTAA ATCTTTGATT ATTTCACCAG CTACAAAACT
    TTTCTAAATA GATATGTATA TAAACAAAAC CACTCTTGTA AGAGTAATAA
    GTGGGGTTAG ATCAGAAAAT ACCCAAAATA AAAGAATAAA AGAGGCATTA
    ATTAATGCAA AGGTTATATC CGTCATTTTG GTGTAAAGTA AAAAGCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3045233 [Map]; Strand: w
      • AT3G09920.3 - [+] show detail - phosphatidyl inositol monophosphate 5 kinase
        Distance: -314; Region: promoter
      • AT3G09920.2 - [+] show detail - phosphatidyl inositol monophosphate 5 kinase
        Distance: -465; Region: promoter
    Flanking Genome Sequence: 12-0321-1 - 5-prime edge
    CATTACATTG NGTNTNTCTT ACGCTAATCC ACGTGCTTNC CAATANTNNN 
    AAGTNAACTT CTGCTCACCA ATTTGAGTTT GAATATACCT ACAAGTTGAC
    CCAACAAATC TTGAGTTTGA AAGAAAAAGA AAAGAAGTTG ATTACATATT
    TTTATTGTTC GAGAAAATCT TTTGAAATCA GTCTAAATCG GCATTACATG
    CCTTACTCTT AATTGAATAA CGAGATCTGG GGGTTAGCTA TAAAGTAGTA
    TTAATTATGA GGGAATTAAT TTAATCGTAT TCATTAGAAA GTAGTATAAA
    TATTCAATAC TGTTAACGAA GGAATGTTCT AATGATATGT AGTCATTGTG
    ATGTGCTATA TGATTAAACA CTTTTACATA TCTTTTTCGG GGCATTATTA
    TAATGATGCT GGGATTAGCT AGTGATCAAA AAAGTTAATT ATTATTTTTT
    GNATTCAGGG AAACGTACTA NCCNAAAAAA AAAGGAAGGT TNCCANNCCN
    GGGGNNGNNN NACCNCCCNN GCNCCNNAAN AG

AT3G09920.2

Model type
Protein coding
Short Description
phosphatidyl inositol monophosphate 5 kinase
Computational Description
phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09920.3

Model type
Protein coding
Short Description
phosphatidyl inositol monophosphate 5 kinase
Computational Description
phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1).
Link
InterPro Scan - TAIR