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12-0825-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1564556 [Map]; Strand: w
      • AT4G03520.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: -364; Region: promoter
    Flanking Genome Sequence: 12-0825-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAG 
    TAAGTGTCGG GTTGTCAATT TTTAGTGACT TCTTATTTCA GTCGCTAACT 
    TTTGTTGACG TTGCCAAAAT ACTGGCCTAA TATGAGCCCA GTAAAAAATA 
    TCTCAAAAGT TTTATGGGCT TATTACAGAT GGGCNTTAGT CAAAGCACAA 
    TCTTACCAAA TAATATTTTT TTAAAATAAG GGTTCTTGTT TTTCTACTTT 
    TTTCGGTTAT TTATGGGAAA ATGATATCTA CACAGCTCAA CGAATCAAAA 
    AATTCAAAAT CTTTTCAATT TTTTTTTTTT TTTTNGGGGG CNNTTTTNAA 
    NNTNNNNNTC CCCNNNTTTT NCCNNNNCCC GTTTTAAAAN GGNTTNCCTT 
    TTTTTCCCAA AANNGNAAAN NAAAANCNTT TTTNGNNGGG GGG

AT4G03520.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Curator Summary
chloroplast localized thioredoxin, similar to prokaryotic types.
Computational Description
ATHM2; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 20603 Blast hits to 19509 proteins in 2977 species: Archae - 276; Bacteria - 10688; Metazoa - 2669; Fungi - 1127; Plants - 1883; Viruses - 7; Other Eukaryotes - 3953 (source: NCBI BLink).
Link
InterPro Scan - TAIR