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12-1103-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14781914 [Map]; Strand: c
      • AT5G37320.1 - [+] show detail - Protein of unknown function (DUF674)
        Distance: 2197; Region: intergenic
      • AT5G37330.1 - [+] show detail - transposable element gene
        Distance: -1522; Region: intergenic
    Flanking Genome Sequence: 12-1103-1 - 5-prime edge
    GAGTAGACNT AACTATCTCT TCCTGGCCAC TTGATCACCA TATTTTACTC 
    TTTTCTATNT NGGNNNATCT TNTCTCTTTG NTTGAATGTA TGATTTGGTT
    GGTACTTTGA TTTGCAAAGC ATTAGTACAT CCACTATATG TGGTCGAACC
    GGTTAATTAC TAGTTACTAG AAATCGACCT ACAAGTTATG TGGGTTTATT
    GGTATCATAT ACTATTTTAG TTATTTTATT TTATTGAACA ATGTGTTCTT
    AAATATGAAT AAGTAGATAA TTTTATTGAA TTATATTTTG AAATTTTGTC
    TACAATAATA CTATATATGA ATTGAATTAG TTAAGTGTAG TATTGACTTT
    TGTCTTGGTA AGAAATAATA AAAATGTTAA AACTGTTAAT AGTGGCTATA
    ATGTTAAATG ACTAAAATTT AAAAATAATT TTTATGTAAT ATTGTAATAA
    TATAAATATT ACATTGTCTT AATATATGAA AATATCAGAT GATAGTATCA
    TGACCTAATA TAATGTTTTG ATAAAAAAAA ATTAATGTTA CTAAANCGAT
    ATTATACATC CAATACCAAA AGAATTTGAT CCTTATTGTT CATGTCCATG
    CATAACATTA TCAATGCTNT TTTAATCCAN ATN

AT5G37320.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF674)
Computational Description
Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G43240.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G37330.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR