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12-1309-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7194088 [Map]; Strand: c
      • AT1G20730.1 - [+] show detail - Protein of unknown function (DUF833)
        Distance: -168; Region: promoter
    Flanking Genome Sequence: 12-1309-1 - 5-prime edge 
    NGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTATT CCAACGCGCT TAAGAGCTTC TTTATCCAAT 
    TTTGGATATT ATACCTTTTG CTGTTTTCTG TCACCATCAT ACATATTCTC 
    TCCTCCATTC ACTAACCACC AGAAGCCGTG TCTATGTGTT TCTAATTTAC 
    TTTTACGGAT TCATGCATGT AAAACCANN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7200223 [Map]; Strand: c
      • AT1G20740.1 - [+] show detail - Protein of unknown function (DUF833)
        Distance: -171; Region: promoter
    Flanking Genome Sequence: 12-1309-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    GCCTATGTTG GAAGAAGCTG ACAAGCAAAG GAAAAAGCAG AGCACAGTGA 
    ATCATCTTTC GGCTATAAAA ACAGAGAGGG GTCACAACTC AAAATGACAA 
    CAAGAACAAC ACAGAGCAAG AGATTCAATA GCAAAAAACT TTTACAATAT 
    TCTTTCAAAA ACAAAAATGG GGATCGTAGC ATTCCAATGG GGAGAGGGAG 
    AAAACACACT GACGCTGCTG CAGAACAGAG AGAACTGGCA ATTAAGGCAA 
    GTTTAAAATT CTTTCGACGT TTTAGGTTAT AATTTGTGCA TCAGACATTG 
    TTGATGAACC TTTTTCTGTA TCGGTGATTA ATAGGTCAAT AAGAAAGGCG 
    GATTGGGTTA AAACTGAAAC TGACCAGATA TTAAGTGGTC GTTGCCCAGA 
    GACCGATGGG ACGTGGTTAG GTATTTCTAC TCGAGGCCGA GTCGCTTTTC 
    TTGTGGAGGC AGGGCCTATT AACAGAGACA GATTCAACGG CGCCGAGAGT 
    CGTACTCTTG AGTTCTTAGA GGTTTGATTA ATGCTTTTTT CTTTCGTTGA 
    TTTTTCGTTC AAAACTATCT GGATTCTCAC GGGATTGCGT TGATTACAGA 
    GCAACGAGAG TCCAGAGGAC TTTGCAAAGT CATCGGCTGC AGATTACATA 
    CGTAACAAGA ACACAGCCGC CTTTCATCTA ATTGTGGCCG ACATAGCTTC 
    AAACTCAA

AT1G20730.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF833)
Computational Description
Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20740.1); Has 432 Blast hits to 427 proteins in 156 species: Archae - 0; Bacteria - 238; Metazoa - 13; Fungi - 0; Plants - 127; Viruses - 2; Other Eukaryotes - 52 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20740.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF833)
Computational Description
Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20730.1); Has 322 Blast hits to 322 proteins in 133 species: Archae - 0; Bacteria - 194; Metazoa - 18; Fungi - 2; Plants - 74; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR