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12-3159-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10916398 [Map]; Strand: c
      • AT4G20210.1 - [+] show detail - Terpenoid cyclases/Protein prenyltransferases superfamily protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 12-3159-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAGA GGAGCGTATT GAGGTAAGAC CGAGAAGGAT 
    CTGTAAGTGC GGATGAGGCA ATAATAAAGT GTAGAAAGTA AAGAGACAAG 
    AAATTTGTTA ACGAGGTTCG GTTTTTCCTA CTCCCCGGGA CCAAGTCCAG 
    ATTCGATTTC ACTAGAACAA AAAAGCAAAT TACAACCAAT TCGCAAACGC 
    ATAAAACAAG CACATCCCTC TTGATTTATC GCTCCCTTCT ATTAACGTAA 
    AATCTTAAGG ATAATCTCTA CCCTTAACTA AACTCCCCCT GAGTCTAGAT 
    TTAATCAGGA TAACCTAACC CTGAGCTAAA CTCCCCTTGA GTCTAGACTT 
    CAATAACAAA CTACTTGATC ACACAAGCAC AAACTCCGCA AAACTAAGTT 
    GCTCACAATC TCACAGAAAG CTCTCAAAGA TTTCTTCTTT ATGCTTCAGC 
    TCTCTTGCCT CTCCAAGACG TCCTACCTCC TCCTTATATA GCCAAAACAA 
    TTTCCTAATC ACCATAGGAG AAGATTTCCT TTTTCCATAA GAAAAAGTAA 
    ATTTCCTTTT TACTCTTTTT CTTTTTCTCA TCAAACTCCA CTTTCATCAA 
    GTCTTCCAAA TCTTTTTAAG TCCTTTTTCC TTTTTGATTC ATCCTCTAAA 
    CACGCTCTTC TCAAATCTTC TAAAAACCGA CACTCACACA AAACTGTCGC 
    ATCATGAATT ACTTCTTGAA TCATTCAACA

AT4G20210.1

Model type
Protein coding
Short Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Computational Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20200.1); Has 1635 Blast hits to 1609 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1631; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR