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12-3465-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22560670 [Map]; Strand: c
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-3465-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACAT TTTTACACAA 
    TCAACAGTTT ATGCGTTTAG GTGAAATCCA TTTGTTGGTT TCTCTTTCAT 
    CTTGCAGTGT CCTTCTTCTA TCTGTTGTTT TCTTGTACAA GTTCCAATAT 
    GTTTGTGTTG TTCGAATAAG TGACTGATAA TTTACAGGAT C

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22560579 [Map]; Strand: c
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-3465-1 - 5-prime edge 
    CTGAAAAGGA TGCAAAACGT TTTAGGGAAT ACAAAAGGAA AATGAAAAAC 
    ATAATCCAAG TGAACAACAC AACACATTCC AGAAGTGTCA GAATGCAAAT 
    CAATTATACA ATCCAAATGC ACTACAAGAA GATAGATAAA GCAATAGAAG 
    AAGAAGCGTG GATTCTGATT TTTGACATTG AGGAATCCCA TTCCTGAGTA 
    ATGGATCTTT AGACGACGTA CTAGCTCACC ACTAAAGAAG AAGAAAATGA 
    AACAATGTTA GCAACATTGC ATTGAAATTG AGAGGCACAT TATATTCTAT 
    TGTGTGATCC ATTTTGCAGA AGGATAATAT ATCATGCTAA CCTTGAAAGA 
    AACAATAGCA AGAAATACAA ATAACTCAAG CATAAGAGAT GAAAAGAAAT 
    GATTACCGGT TTGATTGAAG GCAAGAATCG ATTTTTGGTA TCTTCGTCCT 
    CCCATTCAAG CTCATTTTCC TGTTCTGGAG GATC

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR