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12-3927-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21938203 [Map]; Strand: w
      • AT1G59710.1 - [+] show detail - Protein of unknown function (DUF569)
        Distance: -164; Region: promoter
    Flanking Genome Sequence: 12-3927-1 - 5-prime edge 
    GGGATAATGT GCTCTCACAT CGAAAGTTAA ACGACTTATC TTGACGACAC 
    TAGTACAATT TGTCTAATAG TAGTACTTAA TTGACCACTA GTCCTAAGTA 
    ATCTACTAAT TTTTCTGTTT TACATTTTAA TTAATCTGCT AGTACTAAAT 
    TGTCCTCCAT GGACCCTCTT CATTGCATCT GCTCCTGATA AGCCAAAAAA 
    ATTAATATCA TTGAACCAAT CAAAAATTTC CCGGTCAGAG ATCTAGCAAA 
    AAAAGCTAAC AATTATTAGA AGAAAAAAAA AGTANCTACC AAAAANAGTA 
    AAATNGACAA AAAGTCAAAA ATCACNCAAA ACTCAAAAAA AGAAAGATNT 
    GAAAAANGAG TAATAATAAT TTAAAAAATA ATAAAATNCC GTTTATGTAA 
    AAAANACAAG GTCCCAAANA CCCAGCTNAA GTCCAGCTCT CTGTATNCAT 
    TAAGTTACCT TCTAAACATT CACACCATNT NTTTNTCTAA CAATGGAAAT 
    TTTTNAAAAG GCCAAAGCCG TTCGTCTACG GAGCCNTCAC GACANGTACC 
    TANTCGCCGA TGAANACAAA NAATCNGTAA CTCAANAACG TAACGGGCTC 
    ANCNGGTGCA GCCAAATGGG CCNGTTGAAA TAATCCNAGG CTCAACAAAT 
    NTAATCCNGT NTAAAAGGCG CTTTTGGGAA NTACTTAACA GGNGTCTATN 
    AAACCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21938079 [Map]; Strand: w
      • AT1G59710.1 - [+] show detail - Protein of unknown function (DUF569)
        Distance: -288; Region: promoter
    Flanking Genome Sequence: 12-3927-1 - 3-prime edge 
    ATTATCCCGG CGGGCTCATA TTGGTTAAGA AAGATGTGAA GGTCTGAAAA 
    GTGAAAACCC AATAGAAACT TAATATTAAA GCAAGTTTTT TAAAAAGATT 
    TTTGAAAAAT TTCCAAAATT ATCTCAGTTA CCAAAAATAA TTATGATCCC 
    GAATTAAATA GATTTCCATG TTAAAGGGGG GACGACCCCT AATAATCTTG 
    GGCTGACCCT TATATTTTCG ATAAACATAA ACTGAAAATA GTCCGTAGCT 
    CATACACCGC GTCATAAATC CTAGCATAGA CTGAACACAA CACTTTAAAA 
    CTTCAACTTA TTTTCGTTTT ACATGTACAC AAAACACAAT TGCATTGCAA 
    TACATTTCTA AGATGATCTC AAGATCTTGA AGCTGCGGAT TGAGATCTAA 
    CCTCAAGTTC TTGTANAAAC TCAGCTACTT TTTCGATCTC CGGTGCCACA 
    TTCTTCACCG TTTCATCGGA CAAGAACCGG TCGGCCCATT TACAAAGAGA 
    AGGAGTTTTT GATTCGTCTA AAAGTTTTTC TGCTTTAAAC TTTTCTCTAG 
    CTTTCAAGAG AACCACNAAG CTCCANCCCG GGCCGNNNAC CNCNCGGCCC 
    NNT

AT1G59710.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF569)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Actin cross-linking protein (TAIR:AT1G27100.1); Has 232 Blast hits to 209 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR