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Mutant Lines
12-4375-1

12-4375-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 6929691 [Map]; Strand: c
  - AT5G20490.1 - [+] show detail - Myosin family protein with Dil domain
    Distance: 0; Region: intron27 (CDS)
  - AT5G20490.2 - [+] show detail - Myosin family protein with Dil domain
    Distance: 0; Region: intron27 (CDS)
Flanking Genome Sequence: 12-4375-1 - 5-prime edge
```
CTCCAGAGAA TGGAAATTAT CTTAATGGAG GAACAAAAAC TACCCCGGTA 
AGGGGAACTG CATTTTCTGA TTAAATTGCA CGTTCCAAAG TAGACTTGGA 
TACGTTGTTG TTTCTTCAAT TGCTTATCGT CTAAAAATTT CACAGGACAT 
GACTTTTGCT GTACAGAAAC ATCTGAATGA AAAGCTACAG GTATCAGATA 
TATGAATT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 6918919 [Map]; Strand: c
- AT5G20470.1 - [+] show detail - myosin, putative
  Distance: 0; Region: exon5 (CDS)

CTCTGGAGTT CTCTGAACAT TGAAAAGAAA AAAAGAAAAA AACTATATTA 
ACAAACATGC CATCTTGTAA TTTTATAAAC CACAATGAGG AAAAACAGTG 
CATGTTGTAG GCACCGGTAA AAGCATTGTT TTTGATTGTG TGGCCATAGT 
TCTGCTGGTT AGCGAAATAG CAAGTGCCTT TTTCTGTTGA TTGTACATCA 
ATTTATTTTA CGAACCTTTT TATTGATTCA TGAAGCTGTT CTGCTTTTGT 
TAAAGCATTT TCAACCTCTG TCGCCTGGTC GGAAATTCTA GCTTCTGCCG 
CAGAGAAACC TTTTATCAAA TGTTCTGCGG CTTGTCGTTC AGCCTGTAAA 
AAAAGATGAT TTAAACCAAC CAATCCGCTT CACGTTATTA AGGGACTCAT 
CAACATATAT TTACAAACTT CGTTAGTGAA TACATTACGG ATTATCCAAT 
ACGTGAAAAC ACACATACGT ACCTTTAGAG CCTCCACCTC TGAAGTTAAT 
GAATTGATTT TTTCAGTATC CTCAACCAAT ACCGGAATCT CCTTAATGAC 
TGGAGGTGCT TCTTCAATAG CTTTCCTTGC AGCCTCCCTC TCTCTGACTA 
CGGCAGCGTT TGCTTCTTCA ACTTGCAACC GCATTGCTTG TAAAGCCTCC 
TGTTGTTTTG CATATTCTTG GGTTTTTGCT TCTTCCAGCT CCTGTTGTTN 
CTCTTTCGCC TCTCTAAGGG CTCCTGNGTC T

AT5G20470.1

Model type: Protein coding
Short Description: myosin, putative
Computational Description: myosin, putative; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 43606 Blast hits to 24266 proteins in 2175 species: Archae - 661; Bacteria - 6400; Metazoa - 22997; Fungi - 3265; Plants - 2573; Viruses - 146; Other Eukaryotes - 7564 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G20490.1

Model type: Protein coding
Short Description: Myosin family protein with Dil domain
Curator Summary: Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.
Computational Description: XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, myosin complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 40570 Blast hits to 26875 proteins in 2480 species: Archae - 466; Bacteria - 5527; Metazoa - 21427; Fungi - 3168; Plants - 2202; Viruses - 135; Other Eukaryotes - 7645 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G20490.2

Model type: Protein coding
Short Description: Myosin family protein with Dil domain
Curator Summary: Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.
Computational Description: XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: myosin complex; EXPRESSED IN: stem, fruit, flower, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 39115 Blast hits to 25959 proteins in 2421 species: Archae - 443; Bacteria - 5231; Metazoa - 20936; Fungi - 2937; Plants - 2132; Viruses - 125; Other Eukaryotes - 7311 (source: NCBI BLink).
Link: InterPro Scan - TAIR