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12-4580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22247816 [Map]; Strand: c
      • AT3G60190.1 - [+] show detail - DYNAMIN-like 1E
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-4580-1 - 3-prime edge
    GCTGAGAGAG AGAGACGAAG AAGAAAAATA TTCGTAGGGG CAAAATAGGA 
    AAATGAATTT AGAGAATAAA TGTCTCTCTT TGATTTCTAG AAGGTTTGAT
    TTGTGTGCCT GTGGCTGTGT GGTTCGGTCG GTTTACAGAT AGCTTANCCG
    CCGTTAAGGA GTCGTCTGGC TCTGGTTCGT TTTGGTTCGG TACGGTCTGG
    TTCTTACTTT TCTAGACGGT CAAATCTAAA ATAATGAAGA TAAGATTTGT
    GTCCCTTTAA TTTGAGATAT TTGTAACCTG TTTGAATTTT CGAATTTTGA
    AATTCCACAT GGACCCCTCA CACAAATACA AAATAATAAG TCTAGAAACA
    ACAATCAACA TTGTTTAGAA GGCCCAATAG ATATAGAAGA CTTTTAAAAG
    GACCCAATAA TAAAGTTAGG TCCAGGAAGA GGGTAGGAGG CTATATGTAT
    ACAAGCGGTT CTCTAGTTTT TATGGGTTTT GTGTTATCCA NTCTGAATTA
    TTTTAGATTT TATTTTANAA ATCACAAACA TAAAATAATA TTTCTAGAAA
    ATTTTGAATT TNCTTANTAC TTGGTAAATA ATGAATCTTC TTCNCAATNA
    ACATANACNT ANNCCCAAAA CCATGAGTTT CTNTCAACAT CCTGATTANT
    TATCANCCNN CCCANCTNNN TGANTGANTT ACCCNNCTNA CCTANCNTTT
    TCNNNCTTNN AANANNCNNA NCTNNNTTTA

AT3G60190.1

Model type
Protein coding
Short Description
DYNAMIN-like 1E
Curator Summary
At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central
Computational Description
DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink).
Link
InterPro Scan - TAIR