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Mutant Lines
12-5303-1

12-5303-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 25723005 [Map]; Strand: c
  - AT5G64310.1 - [+] show detail - arabinogalactan protein 1
    Distance: 359; Region: intergenic
  - AT5G64320.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 238; Region: intergenic
Flanking Genome Sequence: 12-5303-1 - 5-prime edge
```
GATAATAATG CTGTAAATTC TTCATTTGCT CAAAAAAACT TTTTGGTAGA 
ATT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 25723121 [Map]; Strand: c
- AT5G64310.1 - [+] show detail - arabinogalactan protein 1
  Distance: 475; Region: intergenic
- AT5G64320.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 122; Region: intergenic

TTATTATCAA ATTGACATAT CCATAAAAAA AACTGGGCCT TGAGGCCTTA 
ATAGTAGCCC AATAGATAGT TTAATTGAAT AATTGAGGAA CTTGAAACTA 
TAAGGGAAAA AATCATAATT TGGGTGACAG CATACACATA CCACAGTAAC 
ATTAACCAAA CAAATTTTGT ATTTAGTTTC AAAAAGCTGC ATTATAAAAC 
CTTCGTCTAT CAAGTGTTTC TTGGGGAATA ATACTCTGTA ACAAAATTGA 
CCAAGTTCTA TGATTTGGAA CAAAACCATC TTCAATACCT TCATCCAGAA 
GTAAGCAAGC ATCATAAACA AAACCTCCTT TGCACAACCA ACTCATCAAA 
GTGTTAAACG TCACCGTATC AGGCGGTATT CCTTCAGCCT GAAGCT

AT5G64310.1

Model type: Protein coding
Short Description: arabinogalactan protein 1
Curator Summary: Encodes arabinogalactan-protein (AGP1).
Computational Description: arabinogalactan protein 1 (AGP1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G64320.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR