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Mutant Lines
13-0168-1

13-0168-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 9541573 [Map]; Strand: c
  - AT2G22475.1 - [+] show detail - GRAM domain family protein
    Distance: 0; Region: exon1 (CDS)
  - AT2G22475.2 - [+] show detail - GRAM domain family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 13-0168-1 - 5-prime edge
```
GACAAGGCTA TCTCAGTGTT CGCATCCTCG ACTCCCTTCG TTTTCGAATC 
GACGACGCTT AGCGATGGAT C
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 9541707 [Map]; Strand: c
- AT2G22475.1 - [+] show detail - GRAM domain family protein
  Distance: 0; Region: exon1 (CDS)
- AT2G22475.2 - [+] show detail - GRAM domain family protein
  Distance: 0; Region: exon1 (CDS)

GCTATNGANA CGAAGGGAAG CGATNNGACA CCGGTGAAAG CTNCGAGTCG 
AACATCGTCT GGATCGAAGA AATCTGTNCA TTGGAGCCCC GAATTGGTGT 
CTGGATCTCA GGAACCGGAT CAGAAAGCTG CATCGTCTTC TTCGGCTGGA 
TCTAATCCGT ATATTGCTCG TTCTCCAGCT GAGACTTCAN ATGCTTCGTT 
GAAAGGTAAG AGTGTTGTGA TCGTAGCGGT GAGAATTGAG ATTGTGTATT 
GTAGCCTTAT TTACCTTTTT GTGGATCTCT CTCTGTGTGT NTGTGAATTG 
GATTCNNATA CNATGGANAC ATGTGANAGG AGTGCTTGGT ATATGGGGAA 
AGACGGTGNG CNCGANGCTG CAATNAAGCN TTGGAGAGCC TTTGTCTGGG 
AACACATGGG NATACCCCNT NTAGTCTNTN TTNNNGTTTN NTNATNTTTT 
TNTTNTAAGT TAAAATNCAA TGGCNTTAAA AGTTNTTTCG GAANCNAANT 
AATAANCCAN NNNGGGCGTT GNNAAAAANT NTGCNNTNTT CNNGACTCGN 
ANTTTNNAGT NTGGNGCNNN AAAATNATGA GTTCNTNTTT NATGGGTNNT 
ATGANGGGNT NCTTCNCNTN GAANGGNNAN TNNTGTTAGG CCNTTCACGG 
NGTTTNNNAN TTAGNCNGCT NTCNCNTTTT NNTNNNNCCC NNANGTTTTN 
ANTTNNTTNT TNTNNCACGN ANANTTTANC NANNNTANNN GCATGNAANN 
ATCANGG

AT2G22475.1

Model type: Protein coding
Short Description: GRAM domain family protein
Curator Summary: Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.
Computational Description: GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 360 Blast hits to 359 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 359; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G22475.2

Model type: Protein coding
Short Description: GRAM domain family protein
Curator Summary: Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.
Computational Description: GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR