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13-0918-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5932083 [Map]; Strand: c
      • AT1G17330.1 - [+] show detail - Metal-dependent phosphohydrolase
        Distance: 252; Region: intergenic
      • AT1G17340.1 - [+] show detail - Phosphoinositide phosphatase family protein
        Distance: -1787; Region: intergenic
    Flanking Genome Sequence: 13-0918-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG CAATGACTTG ATCCACTAAA ACATCCAGAA 
    GACATCTTAT CATCTTCCAC TAATAAAATT TAAAGAAGAC TTAAAAACGA 
    AAATAGCAAG TCAATATTTA AACCAGTTGA CAAACAAAAA GCCACTGGAC 
    TTTTATAAAA CCCTTTACGA AAAAGACAAC AACTGACTTT GGCGTAAAAA 
    AAAAAATTTT GAAAAGAAAN CNATGGGCTN TNTCGGGTAA NCCTNGCTNG 
    ATTTNTTCCA CAATCNTNGG CNTNGACAAA ANAATANAGT TTTTTTTTTT 
    TAAAAACAAA GCANTTTTAA CATTTNTAAA NGNNTNGTTN TTACNANCTN 
    TTNAAATANN GNGGCCTTAA CCNAAAANTA AAAGGAGNGN GNGNGNNGCC 
    CCTNNGTTTA AAACCTAANC CNCNTNTNGG TTNGGGNGGC CCNGNTTACT 
    CAANAAAATC NGGGGGAANA AANCCTNGGN TTTTNGGNTT NATTNATNAT 
    TTTNAACTTT TNANGTNGAC CCATCCCACT NTTNNTANAA CTCCTTAAGA 
    NACTTTTCCA TGAACTTGGG CCTTTTNTNN GCCCTCCTTT TACCCGCCNG 
    GNTGGGTTTT CAANCCNCNT TAAATNNNAA ATNGAAACAA NTTTTTCNNG 
    TAAAAAAAAG GNGGGGGGGA ANCTTACCNC ANTTTTCATN NGCTTNTTNN 
    CCTTGGGGGG TTTTT

AT1G17330.1

Model type
Protein coding
Short Description
Metal-dependent phosphohydrolase
Computational Description
Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); Has 1677 Blast hits to 1677 proteins in 841 species: Archae - 70; Bacteria - 1404; Metazoa - 0; Fungi - 90; Plants - 42; Viruses - 5; Other Eukaryotes - 66 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G17340.1

Model type
Protein coding
Short Description
Phosphoinositide phosphatase family protein
Computational Description
Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G14205.1); Has 1726 Blast hits to 1665 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 579; Plants - 272; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink).
Link
InterPro Scan - TAIR