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13-1505-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17874012 [Map]; Strand: c
      • AT1G48370.1 - [+] show detail - YELLOW STRIPE like 8
        Distance: -500; Region: promoter
    Flanking Genome Sequence: 13-1505-1 - 3-prime edge 
    GGGTCTACTA TGGTTTGTAC ATGGCCTCAG AGCGGCGGGC TTCAAGAGTG 
    GTGATCGAGG TGGATTCAGA GCTGGTTGTC GGGTTACTTA CGACGGGGAT 
    TAGTGAAGCT AATCCGCTGT CCTTCCTGGT GCGTTTGTGC CATGGCTTCA 
    TATTAAGGGA CTGGATAGTT CGTATTGTTC ATGTTTATAG GGAGGCTAAT 
    CGTCTTGCGG ACGGATTGGC GAACTATGTC TTTTCTTTAC CTTTAGGTTT 
    TCATTCTTTT GAGTGTGTTC CCGAGCATGT TCGGGATATC CTTTTAGAAG 
    ATACCGGTGG AACATGTTTT CCACGTCGGG TGCGTTTGTA CTATGCTTTA 
    ATTTTGGTTT AATAAAGTAG GGGAGACAAT CCCACCAAAA AAAAAAAAAA 
    AAAAAANCCC TTNNTTNAAA AAAAAAAAAA AAAAGGNAAA GNTTTNAAGG 
    GGGNAANCCN NTNCTTTNNC NNNNAAAAAA AAANTNANNT TTTNNNANNC 
    TTTTTNAAAA AAAATTTTTT NNNCCCCNNA AAAAAAAAAA NCCTNTTTTT 
    TTTTTTNNGN NCCCCNNTTT TTTTTTTTNN CNNNNTTNNA NAAAAAAAAN 
    CCCCNAAAAA AGAGGGGGTN NNCNCNCCNN NAAANNTNNN NNATTGGNAA 
    NNANNNTTNN AAAAAANNGG GNAAANNCNC CCCCCTNNAG GGGNNNAAAA 
    ANANNNTTTT N

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17873896 [Map]; Strand: c
      • AT1G48370.1 - [+] show detail - YELLOW STRIPE like 8
        Distance: -616; Region: promoter
    Flanking Genome Sequence: 13-1505-1 - 5-prime edge 
    GTAGACCCCC CACAGCTCGG CTAAAGGCGC TGAACAAATC CCTATATTGA 
    GAGCAAAACC ACCACACCAA TTCCCATTCT CAAGGCTCTT GTCGTCGCTA 
    TCTGTGACTC ATTTCTCAGA AATTGCCATT TGTTTTTGGT ATTTGAAATC 
    TTATTAAACT TCTCCATATA TAGTTTTAAT TACTATAGAC TGTATTAAAT 
    TTGATTTTAT GCATACCACT AAGTCTAAGT GAAAAATAAT ATTATTCAAT 
    AAAGATGAAA TGACTTCATA ATATTAAAAT TAAGAAAATC CTATCATGCA 
    TACACAATTA AATTGTTATA TTAATAAAAA TTCATTTTTT TGGATAAATT 
    TTAAATTAAA AAGGGATACT TTTATATTTC TATTGGGTTG TAACACTTCT 
    TTATAAAATG GTAACACTTA TGGGAAAGAA AGAAAAAAAT TATGTTGAAA 
    AAGTTACATT GCAAATTTTC TTTTCTGGTA TCATTACATT GCAATTTTTA 
    TTAGGATGTA TCTACTATAT NTAATAGTAT ACATAAATTC AGTATAAATA 
    ATTACATGTC AAATCATATT ACATAATCTA TAATAACTAG AATGGCNTCT 
    ANTATTAATT ATTAAAAAAT TCAAATTGAT TNTGGATTAC NAACCCCGGG 
    CCGGTNNANC ANNCGGNCCC CTCCGGCCGG GGAAACGN

AT1G48370.1

Model type
Protein coding
Short Description
YELLOW STRIPE like 8
Curator Summary
Arabidopsis thaliana metal-nicotianamine transporter YSL4
Computational Description
YELLOW STRIPE like 8 (YSL8); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1797 Blast hits to 1745 proteins in 565 species: Archae - 19; Bacteria - 910; Metazoa - 0; Fungi - 269; Plants - 459; Viruses - 1; Other Eukaryotes - 139 (source: NCBI BLink).
Link
InterPro Scan - TAIR