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13-1897-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22312429 [Map]; Strand: w
      • AT1G60570.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1897-1 - 3-prime edge
    GTTCATGATA ACTCTCGAAC GTCAATCTAT CTGAACGGCA CAATACAGGC 
    TCCCAAGTTT CGGTTTTTAG ATCGAAAACC TCCATCCACC TTTTTGATTG
    GGAATTGGTA GGGAACCCCT CTTGGGGAAN AAGCCCNTNC CTGGGTTTNC
    GCGNTANNNT NNTNTNTTTT TNTCCCCCTT NCCAAACTTT TAAAAAAAAT
    ANGGGGGNNG NGGGNNNNNN GGGGGGGGGG GNCNCCGGTT CCNTNTTTGT
    ANNNTTNGNN NGNNGNTNAG NCANCCCACC TNTGNGAGAN AANACNCCCA
    GNNNNTNTTN TNTTTTTTTT TANANCCNTG NGGTGGGGNC NGNGGNGAAN
    NNNCCNGGAA NTTNNTTNAA NNNNTNTGAN AAAAANNNNN NCGCGGCGTT
    GNTTTNCNNC NCNCCNNNAA AAAAAAAAAA NNNNGNGGGN GNNGNNGGNN
    GNANATNGNN NNNNCNNNNN CNCNNCNCCA GCCCNCNCGN GGNNTTAGGN
    TTCTC

AT1G60570.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G19930.1); Has 2159 Blast hits to 2040 proteins in 157 species: Archae - 8; Bacteria - 131; Metazoa - 640; Fungi - 8; Plants - 1197; Viruses - 129; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR