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Mutant Lines
13-2018-1

13-2018-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 30027229 [Map]; Strand: c
  - AT1G79820.4 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: intron1 (5UTR)
  - AT1G79820.1 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: intron1 (5UTR)
  - AT1G79820.2 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G79820.3 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: intron1 (5UTR)
Flanking Genome Sequence: 13-2018-1 - 5-prime edge
```
CTTTGAAAAA CTNACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
TTCCCATCCT ACTTTCATCC CTTGTAGATC TGCCATTGCC TTTTTTTAAT 
CCAAATCTTA TATTTCTGAT TTACATTGCT TCCGTCAGAT CCGACGATCT 
CACTTTCTCA TCATCTGTCG TCAGCTTTTT TGTTTCTTCT TTTATCTCTT 
TTTATTTTTA AAATAAATAT ATTGTTGATT CTGGAATTTT CCTAGTAGCT 
CACGTCACGT TACGTCATGT CATGTCATGT GTGTGCTTTG AATTTTAAAT 
TGACTCGCAA GGCTGGTTTT GATTATGTGT AAGTGATCGC TGGACTTCAC 
ACACACTAAC AAGTAGCACT TGAATGAAGC T
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 30027225 [Map]; Strand: c
  - AT1G79820.4 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: intron1 (5UTR)
  - AT1G79820.1 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: intron1 (5UTR)
  - AT1G79820.2 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G79820.3 - [+] show detail - Major facilitator superfamily protein
    Distance: 0; Region: intron1 (5UTR)
Flanking Genome Sequence: 13-2018-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
ACTACAAGGA AGCAAGGAAG GAAGGAGGGA TGCAAACAAA GAGAACAAGG 
ATGATGATAG TACCAACCTG GAGAGGAGAT ATGATAACGT CGAGAGGAAT 
CGTCGAATAG AAGAAACTTT TACAGAGGAG CGACGACAAC TTTATGGCTA 
CACCTACACT CACTCCGTTC ACAGGGGATG GGTTTTAATC ACCTGCTCTC 
GCCTCTACCG TTCTTTTCAT GGAACTCAGC AAACTATACT CTAGTACCAA 
TGAAATAATG ACATTTATAT ATGAATT
```

AT1G79820.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1); Has 34820 Blast hits to 34269 proteins in 2224 species: Archae - 604; Bacteria - 18622; Metazoa - 4518; Fungi - 6808; Plants - 2676; Viruses - 2; Other Eukaryotes - 1590 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G79820.2

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1); Has 34820 Blast hits to 34269 proteins in 2224 species: Archae - 604; Bacteria - 18622; Metazoa - 4518; Fungi - 6808; Plants - 2676; Viruses - 2; Other Eukaryotes - 1590 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G79820.3

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G79820.4

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1).
Link: InterPro Scan - TAIR