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Mutant Lines
13-2117-1

13-2117-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 11976946 [Map]; Strand: c
- AT3G30390.1 - [+] show detail - Transmembrane amino acid transporter family protein
  Distance: 0; Region: exon6 (3UTR)
- AT3G30390.2 - [+] show detail - Transmembrane amino acid transporter family protein
  Distance: 0; Region: exon7 (3UTR)

GTNAAAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTA CTGTTGTTTG TAAAAAACTT GTATAAAAAT 
TGTAATGCAG ATACATATTT TGCCTTTTCA TGACTCTCTT AGCTATTGCT 
TCATATCTAT ATACATATTT GGTTTTAAGA GCATGCCTAC GAACAAAGCC 
ACCTTAAGCA ATAGAAAGAT CGGTAACAAG GCGAGTCTAC TACACTAGAT 
TTCTCATAGT AAATGCCATG TACTAGCCGT AAACATATTC TAATCTGTTG 
TATCATTCAT AGTTTATAAT AACCAAACCA AGCT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 11976981 [Map]; Strand: c
  - AT3G30390.1 - [+] show detail - Transmembrane amino acid transporter family protein
    Distance: 0; Region: exon6 (3UTR)
  - AT3G30390.2 - [+] show detail - Transmembrane amino acid transporter family protein
    Distance: 0; Region: exon7 (3UTR)
Flanking Genome Sequence: 13-2117-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAAAGT 
CCGCTTAGAA CACTCAACGA CAAAAGTACA AACATATAAG AGAAGAGAAG 
TCTTGTCTTC TTCATTATTT GATTTCACAT AGAAGAAAAA ACAAAAGCT
```

AT3G30390.1

Model type: Protein coding
Short Description: Transmembrane amino acid transporter family protein
Curator Summary: Encodes a putative amino acid transporter.
Computational Description: Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 4285 Blast hits to 4220 proteins in 397 species: Archae - 8; Bacteria - 394; Metazoa - 1411; Fungi - 683; Plants - 986; Viruses - 5; Other Eukaryotes - 798 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G30390.2

Model type: Protein coding
Short Description: Transmembrane amino acid transporter family protein
Curator Summary: Encodes a putative amino acid transporter.
Computational Description: Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR