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13-2158-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 177979 [Map]; Strand: w
      • AT1G01480.1 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 0; Region: exon4 (CDS)
      • AT1G01480.2 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-2158-1 - 3-prime edge 
    AGTGTGGTGA CATTATCCCT GGAGACGAGA GACCATCCTC GTAAAGTCGT 
    CGGAAACTTA GTCGAAGATT GGTCTGCGTC CATTTCAGCT TTTTAGCACT 
    CTTGTTCTGG ATTACCTGAT CATTTTCAGA TGCTTTCTCG ACGATCTTGT 
    TCTTGTTCTT AGACACGAAA TCTTGGATC

AT1G01480.1

Model type
Protein coding
Short Description
1-amino-cyclopropane-1-carboxylate synthase 2
Curator Summary
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.
Computational Description
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 30194 Blast hits to 30192 proteins in 2936 species: Archae - 881; Bacteria - 20730; Metazoa - 650; Fungi - 807; Plants - 1338; Viruses - 0; Other Eukaryotes - 5788 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01480.2

Model type
Protein coding
Short Description
1-amino-cyclopropane-1-carboxylate synthase 2
Curator Summary
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.
Computational Description
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 28365 Blast hits to 28364 proteins in 2923 species: Archae - 821; Bacteria - 19365; Metazoa - 634; Fungi - 793; Plants - 1286; Viruses - 0; Other Eukaryotes - 5466 (source: NCBI BLink).
Link
InterPro Scan - TAIR