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13-3080-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25499953 [Map]; Strand: c
      • AT5G63710.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-3080-1 - 5-prime edge 
    CCTGCAGTNN ATTAAATCAG TCAATCTCAG TTTAAACAGC TTTTCTTTTC 
    TGCTGCAGAA TCTATAGTCT AAATTGCAGC AAATCGATGG AGAAAGTTAA 
    CTTACTATAC AAGAAACACA TAACTTGTGT GATCAAACTA TGTTAACTAA 
    ACATAAGAAA GCAAAGAAAA GAAAAGACCG ATTTGTGGGT CTAATTATGT 
    CTTAAAAACT AACAGCTTTA ATTGNTTTCT GATGNGAAAC ATTGTCAGAT 
    CAATCCATAA TTCCTCCNTC ANAGCTCATG NGNGCCCCCA NNATTNNNAA 
    AAANAAAGGT NNCCGCCNCG GGGGGGGGGG ANANNCCNGN CNNTNTTNNG 
    GNGNGNNGNN NNNCNNNGGG CGNNNANNAA NANNNNANAN NGGNGNNCNA 
    AGNCGNNNGN GGCNNCACCC NGGNNNNTNN CNNCNNNGNN GNNNNNCNNG 
    NNCGCNCGNN NNGNNNNNNG ACNGNCCCGC NNNNNGNNCG NNNANNNNCN 
    GAAANCNGCN NNCCNNAANG GCCGGNNANA NNACGNNCGN GNGGGGNNNN 
    NGNCNGGANN NAACGNNNGN NGCGNNNNNC GANACGGGGG GCGAACNGNN 
    CGNCNNCNGN ACNCNCNNNA NNNNGAGNCC GAGGANAAGA NNNANGNCAN 
    NNNNCNNNCN GAGNNGAANG GGGGNGNGNG AGNCGGNAAT NCCNGNCGNN 
    AGGNTCNCGC NAANNNAAAN NNCGATGGGG NNGCNNCGNN NGACNACACA 
    NGCANAGCGN GGANCG

AT5G63710.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G10290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR