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13-3208-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29417994 [Map]; Strand: c
      • AT1G78180.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-3208-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCGTAGA GGGAGAACAA CCCTTCTGTT TGGATCATAT 
    ACCGAAAAGC TCCTCCGATT CCCCCCAAGG CTTCTCCACC CCGAGCCACT 
    AGTTTGGTTC GTATCTGTGC CAGTAGAAGA ACACATTTCA GTCAAATTGG 
    TTACACATGC TCATAATTGT CCTGTCGAAC ACTAACACTA GACTTATGTC 
    ACTCTAAAGC AGAGAACTTT GTCATATTTG ATCTAAAATG GTTTAAGGAA 
    TCAAAAACAT ACAGTGTCGA GTGGCAAGCA GAGCACAGTA GCAGTAATCC 
    CAGCAGCGGC ACCAGCAACG AATCTTTCAA AGTTGGTTGC TTCTTGATTC 
    CCAGCGATTT TAAGCAATTG CTTTCTATAG GTATCATAGG CACAAAAATT 
    GACGGCTTTG AAAGGAGCAG TTCGAAGAAC ATTGAGCAAA TTACCTTTCC 
    AGAATCCAGT CAAGCCCTGT GTAGTTGCAA TTGACTTAGC AACCACCAAC 
    AAGTTCCTCT GTTCACCACG AACTGTATAT TCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29418034 [Map]; Strand: c
      • AT1G78180.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-3208-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    GTAACTCCGG TGCAGTTTTC TATGGCGTTT ACGACATCCT TAAGTCATCG 
    TTTCTGCATA CACCAGAAGG CCGGAAAAGA CTGATAGACA TGAAGCAGCA 
    GGGACAAGAA CTCAATGCTC TAGACAGGCT CGAGTTAGGA CCCATCAGAA 
    CTCTCATGTA CGGTGCTATA GCAGGTGCTT GTACTGAAGT AGCCACTTAT 
    CCTTTCGAAG TAGTGAGACG ACAGCTTCAG ATGCAGATGG GTAAAAACAA 
    GCTCAATGCT TTAGCTATGG GATTCAATAT CATTGAAAGA GGAGGGATC

AT1G78180.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G64970.1); Has 23010 Blast hits to 13205 proteins in 452 species: Archae - 0; Bacteria - 0; Metazoa - 9903; Fungi - 6601; Plants - 4239; Viruses - 0; Other Eukaryotes - 2267 (source: NCBI BLink).
Link
InterPro Scan - TAIR