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13-3291-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4996804 [Map]; Strand: w
      • AT1G14580.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: 4072; Region: intergenic
      • AT1G14590.1 - [+] show detail - Nucleotide-diphospho-sugar transferase family protein
        Distance: 2012; Region: intergenic
    Flanking Genome Sequence: 13-3291-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCACATAA TCTGAAGAGA CAAGGAAAGG AGCCACCTTC 
    GCCGCCGGAA TTGATAAGGT CTGCCAAAGA CGAAGATCTG GAGTTGTGGC 
    TGTTGAAATG GCAACACTTG TTGAAGACGA CAAAACNGTG TCACGCATGA 
    TCTTGTTGAT GATACTAACT AGGGCTCTGC TCCTGCATCA TCAAGAATCC 
    GGAGGCGTTC GCGTCTGCGT TCATAACAGC CGCGATGAGG TCATATGAGG 
    ATC

AT1G14580.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 50611 Blast hits to 19416 proteins in 277 species: Archae - 0; Bacteria - 3; Metazoa - 47960; Fungi - 322; Plants - 829; Viruses - 2; Other Eukaryotes - 1495 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14590.1

Model type
Protein coding
Short Description
Nucleotide-diphospho-sugar transferase family protein
Computational Description
Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR