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13-3491-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19828118 [Map]; Strand: c
      • AT1G53170.1 - [+] show detail - ethylene response factor 8
        Distance: -5866; Region: intergenic
      • AT1G53180.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -3323; Region: intergenic
    Flanking Genome Sequence: 13-3491-1 - 5-prime edge 
    NTAAAAANAA CTAAAATCGG TTTTTCGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCANTN CTATCACTTC GAACACAGTC ATTGATTCCA 
    ATTTCTCATG TGTAACCATT TCACAATNTA NTCACACCAA GTCTGAGCCT 
    AGGGAGAAGG ACCAGTCCTC CCTGGTGATT CCCAAACAAA CCCTAGTTTA 
    TAATATTCTT CTGTTCTTTA TGTCTTAATT AAATCATTTT TTGTTTTGTA 
    ATAATTCTAA AAGCACTTCA CATTATTATT TTTTGGTAAT ACATTGAGCT 
    AGAGAATGCG TAATTTAGTA ATGATGAAAA GAAAGGGTTT TTCTTTACAT 
    CAAAAGATGA AAGTTGCCAA CAGGACTGAT GATAAATATG CTAGCTAGTT 
    ATTAGAAAGC TACCAGAGAG ATCAAAATCT CAAAGACACA TTCTCTAGCA 
    AAGAATCTAG CTCGATCGGA AGTGAGAAAG AAAGGATAAA CCTGAATAAT 
    CGNCTCATTA ATTCAACAGT AATCNGTACA ATGAACCATA TAATATACAG 
    GTTATACACT TTACATATTT ACCAANTAAA ACAGCTAACT AATTAACNAA 
    CCGNTTACAN AAAGAATGGN NATTAACTAA CTAGTNNAAA TNTTCCNCTT 
    TTAGGGATGA AGAAGACTCT TTGTCTTCCT ATAAAANNCA TNCCTNGNTN 
    ACTAAGCAAN ATAAAAGNNG ACTGGGGCTT TGCNTNAAAT ATCAGNTNNN 
    ANGGNTAAAT TCTNTTNACC ANANCCCTCT CGNNNTTNGN NGNNTATNNA 
    AA

AT1G53170.1

Model type
Protein coding
Short Description
ethylene response factor 8
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Computational Description
ethylene response factor 8 (ERF8); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5970 Blast hits to 5718 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5959; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53180.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR