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13-3691-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17874766 [Map]; Strand: c
      • AT1G48370.1 - [+] show detail - YELLOW STRIPE like 8
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3691-1 - 5-prime edge 
    TTCATCACAA TGAAGCTAAA CAAAATGCTT AGCGCAAAGC TAACCACAAA 
    AGCCCTAATT GTTAACTGCT TCTTCCACGA AGGAACCTCT CTGCTTTCGA 
    ATATTCCCTC CACGGATTCT TCCTGTTCCT CTCTATCTTC TTCCTCTTCT 
    TCTCTTTGGT ATGGTGTAGC ATTAATGTTC CTCTTTAACC TCTCTATGTC 
    AGGACTTATC CCAGTTTCTT GCAACTCATG TTCCTCAATC TGACGATCTC 
    TGTCAGGAGT TAAACCTCCT TTTCTCATGG TTTTTTTCTC TTTAGATCTG 
    CGAAATAAGA GAGATGGTGA ACAAGAAGAA GAAGAGAAGT AATATTGTAA 
    TAAGGTACAA AGAAGATTTT TTCAGAAAGA GTCAACGAAA ACTGAAGTCT 
    CTCTCATCAG ACAATGAGAT AGTTTAACAC TTTAATACTT TTCACTTTTT 
    TTTTTNTTTT TTNANCNNAN GGCTNTTTTT TTTTTTTTTT TNGGGGGGGG 
    GGGGCCCCCC CNNTTTTTTN NCCCCAAATT NANGCNTTTT NNNNNCCCCC 
    CCCNNGGGNA AAAATNTTCC CCCNGGGGTT TNTTTAAANG GNTTNCCCCN 
    AACCNNCGGG GAACCCCCNN NAAAAAAANA AANCCNTGGG GGGAAAAAAA 
    AAANNTTTTT NCCNCCCCCC CCCNANAAAA AAAAACCCCC CCAAAAAAAA 
    AAAAAAAAAA AAAAAA

AT1G48370.1

Model type
Protein coding
Short Description
YELLOW STRIPE like 8
Curator Summary
Arabidopsis thaliana metal-nicotianamine transporter YSL4
Computational Description
YELLOW STRIPE like 8 (YSL8); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1797 Blast hits to 1745 proteins in 565 species: Archae - 19; Bacteria - 910; Metazoa - 0; Fungi - 269; Plants - 459; Viruses - 1; Other Eukaryotes - 139 (source: NCBI BLink).
Link
InterPro Scan - TAIR