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13-4455-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11145114 [Map]; Strand: w
      • AT2G26180.1 - [+] show detail - IQ-domain 6
        Distance: -11; Region: promoter
    Flanking Genome Sequence: 13-4455-1 - 5-prime edge 
    GTAGAAAGTT TGAGAGTGAG AGATTGATAG AGAGAGAGAG AATATCGGAG 
    AATGTGAAGT NGTGGCAGGT NANGGNGGGA GACGGNCGTC GNCAAANNGA 
    NNGGAGCNCG GNGCCANCAN GGAANGANCN CNACNNGGCG CANTNNNNTG 
    NNCCCAGCGA CANACNAGNN CACCCTNNGA NTCTNTTAAA GGAGNACGTT 
    GGGGCNAGNN NCNANNANNC GTTTNTNNCN AGANGCNTNN TANAACCCCG 
    GCGCNCCNCT TGNCCGTTTT AANTTTATTT GNTGTAAGNA TAATNTTNNT 
    AAANATNCAC TCNCTNGAGA NGNGGNAATN TNNCNNNCNG CNCNNNGNCA 
    GTGTNNTTTG NTNNANGTCN CNANCNGCCN NNNCGAGGAG GGCCGGGGTN 
    NGCCNANGCN TTTTATGANT NCTCTCNCTT TNTNNTTNNG CTNNCCNGNA 
    TTTNTNNTTC NCAANCNTNC NNATCCTCNT TNTTCCCNTC TCCNNNNCTN 
    CTNNCTACNN NCNGCCNNNA CNNNNNCNTC CNCTNGNNCC CATCANTGTN 
    NNANNGNNCN CCNCCNNTGT TNTNCTCNNN CGATANANTA TCNTTGGCNC 
    TCACNCANCT NNNNATCNGC TNTANGNNNT NTTTCTTGAC GTTTATTCNT 
    NCNTTCTGNG GNNGTANNCC NNTNCNACNN NTCANCGAGN NCNNGNCGTN 
    NTGNNGCCNA TGNNACCACT NNNTAAGNNN CGCGCACGGN TTNNNGNCTC 
    GNNCNAAGNN TGNAGCGNNA TGTNNNNCGA ANTNGATNAN NNATATANCN 
    ANNCATCNNA AAGNANAAAA T

AT2G26180.1

Model type
Protein coding
Short Description
IQ-domain 6
Computational Description
IQ-domain 6 (IQD6); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 8 (TAIR:AT1G72670.1); Has 885 Blast hits to 872 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 10; Plants - 828; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR