1. Home
  2. Mutant Lines
  3. 13-4877-1

13-4877-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18152351 [Map]; Strand: c
      • AT4G38932.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
      • AT4G38940.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -336; Region: promoter
    Flanking Genome Sequence: 13-4877-1 - 5-prime edge 
    GTTTTAACGG ATAAAGCTTC CGACGTTGTC CGGTTTATCT TTTCGATTAG 
    ATCGGATTTT TTGTTTGTGT TTTAGTTTTT CTTTTTCCAC ATGTTTACAA 
    AATCAATCCG GTTTGTTTTG TTCTTCAGAA GAATTCTGCT TTCACCAAAC 
    TCATCTTTTC CTTTATAAGG GAGTAATATC TTCACCGTCC ATTGAAGGGA 
    CTTACAAAAT AGGTATTAGG TGAAGCTTTC CTTTGAAGAC TAGATTGAGA 
    GATC

AT4G38932.1

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38930
Link
InterPro Scan - TAIR

AT4G38940.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G10510.1); Has 1232 Blast hits to 1193 proteins in 71 species: Archae - 4; Bacteria - 55; Metazoa - 149; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR