Home
Mutant Lines
13-5544-1

13-5544-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 5196262 [Map]; Strand: c
- AT1G15100.1 - [+] show detail - RING-H2 finger A2A
  Distance: -2059; Region: intergenic
- AT1G15110.1 - [+] show detail - phosphatidyl serine synthase family protein
  Distance: -2756; Region: intergenic

ATGATAACAC ATGCAAGAGT TGTTGCGATG TTACTTAATT TGATTGAATT 
TAGACACATG TAATTTGGTA TAGACGTCCA TCATTGTGCC TGGAAGTTCA 
CCGATATACG TCTATTGCAC CAATATGCAA ACGCTATACT TATCTATCAC 
ATAAGTATGG ATTGATATAC ATCTTTTAGT TCTACATTNT CTTGTCTTAA 
ACATTTGATT TTCAGTATAT CTATATATAG GTAAATCGTT ATAGTCTACC 
AAATAGTTTC TTGAAAGGTG TTATTTTCCA TATTACGTTT TCGAAAAAGG 
GTACTTATAA CCAAATTGAT TGAAAATGAA AAGGGGTTAT ATATGACAGT 
TGGATC

AT1G15100.1

Model type: Protein coding
Short Description: RING-H2 finger A2A
Curator Summary: Encodes a putative RING-H2 finger protein RHA2a.
Computational Description: RING-H2 finger A2A (RHA2A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: response to salt stress, positive regulation of abscisic acid mediated signaling pathway, regulation of response to osmotic stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger protein 2B (TAIR:AT2G01150.1); Has 8620 Blast hits to 8597 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 672; Plants - 4576; Viruses - 12; Other Eukaryotes - 1166 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G15110.1

Model type: Protein coding
Short Description: phosphatidyl serine synthase family protein
Computational Description: phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 329 Blast hits to 325 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
Link: InterPro Scan - TAIR