1. Home
  2. Mutant Lines
  3. 13-5604-1

13-5604-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 179843 [Map]; Strand: c
      • AT1G01480.2 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 1443; Region: intergenic
      • AT1G01490.2 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 216; Region: intergenic
    Flanking Genome Sequence: 13-5604-1 - 3-prime edge 
    CNTCANATGA TCATGAAGGC CATGCCCTTT CGCTTNGGGC AAAACAGAAG 
    TAAAGATAAA TTATCAAGTT TACAGCTGAA ATGTTAATAA GCCGCCCAAC 
    AACATTTATT CACCTAAGCT AGCACCCACA TACATTTAAA AATATATATA 
    TTGACCAGAT TATGAAAAAA CTTTGACAAT AACATAGTNN NGAAATATAC 
    ATAACCTTAA GAAGAAGATG ACCAGGTTAT GAAATAGCAA AATCGAATAA 
    AAACATTGCA GAACTATTGT TCGCAAAACT ATTTTGCAAT TTCGCCATTC 
    CATTGGCTTC CGAAGAAGTA TCAAGCT

AT1G01480.2

Model type
Protein coding
Short Description
1-amino-cyclopropane-1-carboxylate synthase 2
Curator Summary
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.
Computational Description
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 28365 Blast hits to 28364 proteins in 2923 species: Archae - 821; Bacteria - 19365; Metazoa - 634; Fungi - 793; Plants - 1286; Viruses - 0; Other Eukaryotes - 5466 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01490.2

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR