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Mutant Lines
15-0705-1

15-0705-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 14778747 [Map]; Strand: c
- AT5G37320.1 - [+] show detail - Protein of unknown function (DUF674)
  Distance: 0; Region: exon2 (CDS)

CNCCGAATGA CNTGNNCGAA ATGGCTTATA TCATATGCTN TGCTTNNAAG 
GATACNNTGN ACNNTNAANG GGGANGANNG TNGCGTGTCA ATGGATTTTC 
TGATGTGAAT AATGATCCGT ATCAAAGTCA TTGCCTATAC AATGAGAGTG 
CACANGTCAA AAAGTTTCAT TCTATTAGAC TAAGAAAACA CTANGAGAAC 
CACACANTAN AATNACCTCN NGGAAGCCAA TTTGTGCTNC ANNANTCTAC 
NACCTNATCT AATACTATTN ATAANGTGCN TCNTTCAGNC TGAGNNGNTG 
ACGAATGATG ATTNATACCT ANANANGCGA ATATTNGTTA AAAAACCTAN 
CTGNACTGTN TGCATANTNA TAANNTNNAC GNGAANAAAT NTCNNNTNAG 
CCNNTAAANC ATAGNTNNGG TNAANGGNNG CAANAGGANC AAACNAAGCA 
ATANNGAGAN NNTNACTNAA GAGNNNANNT GANGCNCCNT TTNGCCCGGA 
NATNGTATAT TAACAANNAN ATTNGNNANT NCNCAATGNT AAACCANANA 
AACCCCATAA TNNNNNANGG NGNNACAANA AAANNGNTTG NNGAGNGGNN 
AGNNNAGANN AAACNNANAT CAGCGGNCTN ANNAAGTTCN NNGCGNNNAC 
GTNCNANANN NGCAGNCCAT AGNCANATCA CATAAANACA TTACANATAA 
TCANNAANNN NANNANCAAG NAAN

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 14235911 [Map]; Strand: w
  - AT5G36160.1 - [+] show detail - Tyrosine transaminase family protein
    Distance: -760; Region: promoter
  - AT5G36170.1 - [+] show detail - high chlorophyll fluorescent 109
    Distance: 0; Region: exon7 (3UTR)
  - AT5G36170.2 - [+] show detail - high chlorophyll fluorescent 109
    Distance: 0; Region: exon7 (3UTR)
  - AT5G36170.3 - [+] show detail - high chlorophyll fluorescent 109
    Distance: 0; Region: exon7 (3UTR)
Flanking Genome Sequence: 15-0705-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTNATCAC 
ATCATGATAA CTAACCATAA NCNCTACCAA ACNNTNTTAA AAACCATGGA 
GGGAAATAAC ACTANGATNN CTTCCGGANC AACTGGGTAC TNGATTNTGA 
TCGAAGNTGN GCTNNATGGA CANTGATNCT TNATTGAACA AATAATTCAT 
TNNCTCCGAA TGACCAAATC TATTCTTCAA AACCATCNNG TCCGTACTAT 
NANANCTCAC ACTCTTTANC TTTNGCTTTT GNTGAGCCTG ATCATGTCCT 
TGGTTTTGTC TTCATTTGCT GGTGACCGTT GGAGCTGTGG GCTAAATGGA 
TTTGCTTCTT TGTTGGGCCT TATACTTCAG TTTGGCCCAT TCTCATTTTG 
NCACATGGGA TGACATCGNT NTGAGAAGCT
```

AT5G36160.1

Model type: Protein coding
Short Description: Tyrosine transaminase family protein
Computational Description: Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G36170.1

Model type: Protein coding
Short Description: high chlorophyll fluorescent 109
Curator Summary: Required for normal processing of polycistronic plastidial transcripts
Computational Description: high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 17252 Blast hits to 17250 proteins in 2824 species: Archae - 5; Bacteria - 10710; Metazoa - 293; Fungi - 251; Plants - 224; Viruses - 14; Other Eukaryotes - 5755 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G36170.2

Model type: Protein coding
Short Description: high chlorophyll fluorescent 109
Curator Summary: Required for normal processing of polycistronic plastidial transcripts
Computational Description: high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 17253 Blast hits to 17251 proteins in 2824 species: Archae - 5; Bacteria - 10708; Metazoa - 294; Fungi - 253; Plants - 224; Viruses - 14; Other Eukaryotes - 5755 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G36170.3

Model type: Protein coding
Short Description: high chlorophyll fluorescent 109
Curator Summary: Required for normal processing of polycistronic plastidial transcripts
Computational Description: high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G37320.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF674)
Computational Description: Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G43240.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR