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15-0805-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9511773 [Map]; Strand: c
      • AT2G22410.1 - [+] show detail - SLOW GROWTH 1
        Distance: 542; Region: intergenic
      • AT2G22420.1 - [+] show detail - Peroxidase superfamily protein
        Distance: -1446; Region: intergenic
    Flanking Genome Sequence: 15-0805-1 - 5-prime edge 
    GAGGCAACAA TTTCAGGCCA TTGGTTCATA TTTTTTAGCA ATCAAACAAG 
    AAATTATCTG AAACTCGAAA AGTGACTGAC ACTACGGAAG TCGTCATCAT 
    CATGANCTTG CGTTCTGAAA CTCTAAAAGG TAGTGATACN GTTGCCGTTT 
    TTAAGAGATT ATGTTGTCCC CATCTTTAGT TGTCAATTTT TGGTTGAACC 
    AAAAAAAGAG GTTGTCAATT TTCGTATGCA AATTTATTAC ACTTCGGAGA 
    AACGGTCACA ATTAATTAAT ACATAGGACT CGGAAGGTAT CTAGTTTCCT 
    AAGAAATTTA TAGAATT

AT2G22410.1

Model type
Protein coding
Short Description
SLOW GROWTH 1
Computational Description
SLOW GROWTH 1 (SLO1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42589 Blast hits to 14346 proteins in 282 species: Archae - 0; Bacteria - 11; Metazoa - 210; Fungi - 265; Plants - 41374; Viruses - 0; Other Eukaryotes - 729 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G22420.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G19890.1); Has 4727 Blast hits to 4701 proteins in 310 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 328; Plants - 4313; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
Link
InterPro Scan - TAIR