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15-1013-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12049043 [Map]; Strand: c
      • AT2G28260.1 - [+] show detail - cyclic nucleotide-gated channel 15
        Distance: -946; Region: promoter
    Flanking Genome Sequence: 15-1013-1 - 3-prime edge 
    CTNGNGANNG NNGATAANGN NAATNNTCTT CAGTCTNTNG TGNACGCGGN 
    GNACCCANAN NGGNTCNCNN GGGTCGNTGN CCANCNATAG CNNTACNGNN 
    ATCNGNTGCA CGGCNNTNNG TTACGGGTAA TNCGGATNGA ATTTCTATNN 
    ANCAATNACT CATCGGCGGN CTTNTTAATG NCACTNTNCT CAACATGANG 
    TGTGNATTNN ATTACATTAA TCAACAAACA AATTGTAAAC TAATCAGATT 
    TATATTTNAA TGGACAAACT CTTTCTTTCT TTATTCTATT TTTTTNCATC 
    CANAAAAAAC AACAACTNGT TTTTATCATC ATAATTTGGC TTTGNACTTT 
    ATATAAATNA CATATGTGTA AACAACTATA TTAGTACCAC AGNANCTACG 
    TTTTAAAAGT GTNTAAATCA TGTGATCCGN NCAAAAAAAG TNNCANTTTG 
    NCANNCANNC NCNNTNGNAC TANAAACCTT TTTANNNTNT TTTTNAANAT 
    TNNNNNNNNT NNNNNTNNNN NNNAANNAAN NNNNNNNTNN NNGG

AT2G28260.1

Model type
Protein coding
Short Description
cyclic nucleotide-gated channel 15
Curator Summary
member of Cyclic nucleotide gated channel family
Computational Description
cyclic nucleotide-gated channel 15 (CNGC15); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3177 Blast hits to 3099 proteins in 290 species: Archae - 0; Bacteria - 161; Metazoa - 1483; Fungi - 19; Plants - 962; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink).
Link
InterPro Scan - TAIR