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15-2007-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7677989 [Map]; Strand: w
      • AT5G22940.1 - [+] show detail - FRA8 homolog
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-2007-1 - 3-prime edge 
    CNGATNNCAA ACNACTNATA NATCAATNAA NNNANNCCNC TTTAGGCNTG 
    GAAGCCCTTA CACATGAGGA CTTTGGAGCT TACCATTGCN GTGGAAGCAT 
    GCTGCCAAAG TCATGGGAAG CGACNAANAC NTGGTCAGAG CCTTGACCTC 
    CTGTTCCAAA ATGGGTAATG ATCGGAGAGA AAATCGACGG CGGAGCTAAG 
    GAGAGAGCGA GCGTGGCTTA GAGAAGGGAA GCCGTTGGAT GTGGAGAAAT 
    TGCAAGAAAC GTAGACAGGG ACGAAGAAGT AATCAGCTTC ATCTGGGTCT 
    AACGTACGGA CGTCGGAGGA GAGAAGTGCA CGGTGGATAG CTACCTCCGC 
    CGCGAAGAGG TGGCTAGCGC AACGGTCTGA TGCTGTAACC CAATCGTCGT 
    TATAACTCGC CGGTAAATCG TAAACGTATA TCTTCATTCC GGTGAACAAA 
    CCTTTAATCA GAGACCCCAA AAAATCAATT TTTGAGGAGA AGTGAAAGAT 
    TTGAAACAGA GAAGAGATAA AGATCGAGGC TTTTTTACCA ATGGAGGTGG 
    TTTTAATGGC GGAAGATTCG ATGAGAGCAC GAGATGGGAG AGACGACGAC 
    GTTTTTGTGG TTAGACAAGA GACGTATTGA CGACGGTGAG GATTGGTCTT 
    CNACGGAGAA GTANGATGTG AAGAAATACA NAGAGAGGCA NANCCNGAGG 
    ATC

AT5G22940.1

Model type
Protein coding
Short Description
FRA8 homolog
Curator Summary
Homolog of FRA8 (AT2G28110), a member of a member of glycosyltransferase family 47; exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase.
Computational Description
FRA8 homolog (F8H); CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G28110.1); Has 1434 Blast hits to 1412 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 314; Fungi - 4; Plants - 998; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
Link
InterPro Scan - TAIR