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15-2169-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7198622 [Map]; Strand: c
      • AT1G20735.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2169-1 - 5-prime edge 
    NTNTCGANGN TNACCCTNGC CGATTTGGGT AGCNGGAAAT ACATCGCTGA 
    TCTGNNATTA GAAGCTGATA ATCTCGATGC TGGGNTTCNN AGANAAAGGC 
    CNNTGAGGNN GTNGAGNAAT GANGAANGGN ANNCNCATGN CCATNNNNTG 
    GNTGGGNNCN NANNCTNAAA AACNGANNNC TGNNAATNCA AANNCATNAA 
    CCACCCCCTN ATAACAATTN ANNGNNCANG NCCCTCTCCA CGAATGCAAC 
    TACNNTTTGC CGTCGCACAC AATCAACTGC CAGCATANAA GATCTATTTC 
    GTNCACATAT ACAGTNCGAT CTGCCTGGNG AGGTCCCATT TGGAATTGNT 
    GACTAGTGTG TAAACTGAAA TTGTTNCCTT TGTCCCCGAT ATTAAGGTCA 
    GGCGACTCTT CATACAATCT TCCGTGAAAA TCAGCTTCGT ACCCGGTCCT 
    CCACGATGGA ATACGGAAGG AACGAAGCGT GCTTGCTCTG TCTCAGGATC 
    GAAAGCTATG ATACTCCCGT CGTTTCTCAG CCAGTGAAGA GTGCAGTCCA 
    AGTAAACAGG TTTCATCCAT GTCGTGAGTA GGCTTTTTGA GCTAGTGGTG 
    ATAGTTGTTT CCGATAACCT CCATGAATCT CCGNCACTGA TCTCNAATCC 
    GTACACCGTT TCCATCTCNA GTATGCATAC NATCTTGAAA CCTTTGGTGG 
    GACTTACCAC NAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7198719 [Map]; Strand: c
      • AT1G20735.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 38; Region: intergenic
      • AT1G20740.1 - [+] show detail - Protein of unknown function (DUF833)
        Distance: -1675; Region: intergenic
    Flanking Genome Sequence: 15-2169-1 - 3-prime edge 
    ACTGATAGAA CCTAAGTAAA CAATATCTAT CTCATGCCTT TTTTTTTTTT 
    TTTTTTTNNG GGGGGNAAAA AAANNAANGG GCCCCNNTTT NCCCCCCNGN 
    NNNNNNCCCN NNNCCNNTTT TNAAAANTTA AAAANNGNNN GAANNAANNN 
    CCCCAAANCN GGNNNAAANT NTTNNAGGNC TTTNNAAAAA AAAAANGGNT 
    NANNNTTTTT NNNNAAANTT TNAANNAAAA AAAANNNANN TTTTNGGGGG 
    GNAAAAAACC CCAAAAANCC CCCCCNNCCC CAAANGGGGN NNNNTTNNNN 
    NNTTTAANNA AAANNANGGG GNTNCCCCCC CGGGNNNGGN NNCCCCCCGG 
    GCCCTTTANA AAAA

AT1G20735.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20940.1).
Link
InterPro Scan - TAIR

AT1G20740.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF833)
Computational Description
Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20730.1); Has 322 Blast hits to 322 proteins in 133 species: Archae - 0; Bacteria - 194; Metazoa - 18; Fungi - 2; Plants - 74; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR