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15-2794-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10127755 [Map]; Strand: c
      • AT1G29025.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -687; Region: promoter
    Flanking Genome Sequence: 15-2794-1 - 5-prime edge 
    CTTTATAAAC TAACAAAATC GGTTATNCGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCAT GNCGAGAATC TTAGTGATAG NGTACGGCCA 
    AAGGATCNGA CATGGAATTG TTCAACAGAG AAAATCTTGA TNTTGTTTCC 
    CTGCGTTCTT CCTTTGTATC ATATCCCTTC AATCATNGTC TTTACTACAT 
    TTCAATGTCT CACATTGTAA AAGGAAAAAT GTACAGAGAA GATAAAATCT 
    TTTGACATCG ATACATAGTT ATCTTTCTAT GCAAGTAACT CTGGTACAGT 
    CCTTGTTCTA CTAAACAAGT ATACAAGTTG TATTTTCTAG TTCCATAACT 
    CTGATAAAAC AAAATTGGCC TTGGTGTCTA CATTGACGTT TAAAGTTGTA 
    TAATGAACAT TATTGATACA CATATTAAAC TAGAAAATTA GAAGTTTGTT 
    CAAACGATTT TAAAAGTCAA TATAATAGTC ACCAACCAAT CATAGATGCA 
    TAATTAAAGA GGTGTCAATT CACGTTCTCC TAAAATCCAG CCTCAGCTTC 
    ATCAATTTTA TAATTTTACC AACCTCAACA AGGTATTTAT TTATTCTAAT 
    ATATGATAAT AAACCTCGAG GGATATTATG ATAAAACTAT ATNATNNNCN 
    NCGGCTTATN ATAATTANAA AGGTGGACCA NTTNNCNTAT NTTAAAAGNA 
    GACGCNGNNC ATGTGANNGT CCAGAGGTTC AATATTNTAA CCNGAAAGGN 
    TCNNNNTTTT ATACCNTAAC CGCCNNNTTA TTNTTTAANN NAAACCCCTN 
    CCATNTNTTT GTTNCNTNGC TNAACCNTGN GNAAAAGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10127757 [Map]; Strand: c
      • AT1G29025.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -689; Region: promoter
    Flanking Genome Sequence: 15-2794-1 - 3-prime edge 
    TNAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCA 
    TATTCCCCAT CAAATTGTTG AATGTAACAT CCCTGTAGAT CTGAACCCGA 
    AAAATTCAAG ATTCAGCAAC AAGAAAGAAA GAAAAAAAAT CTAAAAAACC 
    AAGATTGAAT CAATGATGAT GTGTACCTGT GAAAATGTGA GAGATGCNTG 
    CTTCTTGCTT CTTTTTTTTG GCACAGAAGT GAAGAGACAA AGCGTTCTTT 
    AGGTTTCTAG ACAAAGCGTT ATTTAGGTTT CTAACCAACG CTTTTGTTCT 
    GCTTTTCCAC CTTCAGACTC GGAGCAACAG CTGCCGCCTA CACAGAAATT 
    TTTAGTCTCT TGAAAGTTAA AAACCGAGAA CCAGTAAGAG CAATGGAACA 
    GAAAGAATGT TCTTCTTTTA AAAACTTACA GCGCAAGTGA TTCCCTTAGC 
    CTGTAAAAAG TCAGTTAGTT TTCTATTAAA AACCAAAGCA NGAACCAGAA 
    CAAAACAATC GATCAGGGGT TTACTTTTTN AAGCTACCNN NNN

AT1G29025.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29020.1).
Link
InterPro Scan - TAIR