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15-3141-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7200797 [Map]; Strand: c
      • AT1G20740.1 - [+] show detail - Protein of unknown function (DUF833)
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-3141-1 - 5-prime edge 
    TTGACACNTA TGNNNTNTGC AGACANATGA CNTCTGNNAA GGCCTNNGGA 
    CTCTNGTGNG CTCTGTAATC AACGCANTCC CGNGAGAATC CAGATAGTTT 
    TGAACGAAAA ATCAACGAAA GAAAAAAGCA TTAATCAAAC CTCTAAGAAC 
    TCAAGAGTAC GACTCTCGGC GCCGTTGAAT CTGTCTCTGT TAATAGGCCC 
    TGCCTCCACA AGAAAAGCGA CTCGGCCTCG AGTAGAAATA CCTAACCACG 
    TCCCATCGGT CTCTGGGCAA CGACCACTTA ATATCTGGTC AGTTTCAGTT 
    TTAACCCAAT CCGCCTTTCT TATTGACCTA TTAATCACCG ATACAGAAAA 
    AGGTTCATCA ACAATGTCTG ATGCACAAAT TATAACCTAA AACGTCGAAA 
    GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7200910 [Map]; Strand: c
      • AT1G20740.1 - [+] show detail - Protein of unknown function (DUF833)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-3141-1 - 3-prime edge 
    CGTAACAAGA ACACAGCCGC CTTTCATCTA ATTGTGGCCG ACATAGCTTC 
    AAACTCAATG CTTTATATCT CCAAACCGCG TTTCTCTGAC TATGGCATTG 
    TCTATACAGA GCCTGTTGGT CCTGGTGTTC ACACACTATC TTCAGCTGGA 
    CTCGATTCCG ACGTTGGATA CAGGGTAATT AATTTAGTAC AAGAATCTTG 
    TAACAGAGTT TTTCCCTATT TGCAAATCTT TTCATATAGA AATGTATAGC 
    TTAATAAAAG CAAACCCTTC TTTTTTGGTC TCATGCAGGA CTTACGTATG 
    AGACACTCTT TTTGTGAGAT GATTAACAGA GAACGACTAC CACCAATAAG 
    GGACATTGCT GAGATTATGT ATGATCCAGT CAAAGCT

AT1G20740.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF833)
Computational Description
Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20730.1); Has 322 Blast hits to 322 proteins in 133 species: Archae - 0; Bacteria - 194; Metazoa - 18; Fungi - 2; Plants - 74; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR