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15-3184-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9460942 [Map]; Strand: w
      • AT1G27213.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -755; Region: promoter
    Flanking Genome Sequence: 15-3184-1 - 3-prime edge 
    CTTGCAAGGA AAAACATAGA TGCAAAAATA TGAGAAATAA CTAAAAAAAT 
    GTGGGAGTTT GTTGTCACCA TTTGAGGTAT GTCCATGTGA AAGCCCTTCT 
    CTTATCTTTC CACAACTTGT ATTAATATTT GTAGTTTAGC NTTTGCCACT 
    TAGTCAAACA ACATTACTAA CATCAACATC CACCATTTGG TCCTCGATCC 
    AAATGTTTCC CCTTTTGCCC TTATACGCCC ATTTTTGAGT TCTTGCATCT 
    CATCTTACAT GATAAATTCC GTTTGAGGAC AGAGGATTAT GGTTATTTTA 
    ATTTTGTGTG TTTGAAAATG TATGATTACA ACAAAACCAT GGTTTCCTTC 
    ATTTCTTTCA AAACCGACAC CAAGAGAACT TTGTTATGCA TGTATGATGC 
    ATCCACCAAA TACGCAATGT GATAAGTATA GCTCAATTTT CTTAAGAAGT 
    ATAATAATGT TTGATTTATT TCTAAGTAAA TAAGCTANAA ACGGTCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15559232 [Map]; Strand: c
      • AT3G43654.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-3184-1 - 5-prime edge 
    TCGNGNTACN CNAGGAACAA ANCCGGTTAT ACGATAACGG TCGGTACGGG 
    ATTTTCCCAT CCTACTATTG TCCTTGGNAC TCATGGTAGA NCTTNTACTT 
    GGCACCATAC TATGGATCAG ACTCCACATN CTAAACGTTG GTTGAGAGAT 
    TGGTATGCTT ATANATCGCT GATTATGGAG AGGTTTGAGG AAGTGTTATT 
    AGGATC

AT1G27213.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G43654.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 4.7e-150 P-value blast match to GB:CAA73042 polyprotein (Gypsy_Ty3-element) (Ananas comosus)
Link
InterPro Scan - TAIR