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Mutant Lines
15-4489-1

15-4489-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 7220867 [Map]; Strand: c
- AT1G20780.1 - [+] show detail - senescence-associated E3 ubiquitin ligase 1
  Distance: 83; Region: intergenic
- AT1G20790.1 - [+] show detail - F-box family protein
  Distance: 94; Region: intergenic

GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTTACAAAT TGGTTTAATC TATGAACTCA ATATATATTT 
GATGCAAAAG TAAGCACAAC TCCCTCCGCA ACACACATAA GCCTTTTTAA 
TCTGAGGCCA ATCAAATGAT TTCGATTTCC AACGTAGGAT TTATAAACAA 
ACAAATCAAA TAGCTTAAAG CACACGCAAA TAAGAATCGG AATTTACAAT 
ATATACCCAG AAAAAAACTG GATGCCTATT AACAAGTAAT CCCATCAAAA 
CAAAA

3 prime edge [+] show sequence

Chromosome: 1; Position: 7201394 [Map]; Strand: w
- AT1G20740.1 - [+] show detail - Protein of unknown function (DUF833)
  Distance: 0; Region: intron4 (CDS)

TCACAACCAA TGCTGTCGTA ATTCTTGTTC CATAGTGTTC GTATCCAATC 
TGAAATTTAA AATGTTAAAA AGGAAGAAGA GAGGTTACAA TAATATAATG 
CAGGTAACGA TCATAAAAAA AAAAGGGGGC NTCAATTNTA ATGTTTTGAG 
TTTCTTACCT TCNTGTCNNC AAAAAAAATA AANCTCANTA CCCCGGTTTC 
NTAANCTNCC ANCCCGGNCC GTNANCCNCC CNTGCCCTTT AAATTNAAAA 
CTGGCCCNAN GGNNCCNCTN TNNNNNNNNT TANAAACNNN TNCNGGNNCC 
NNNNCTTNNC NCNC

AT1G20740.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF833)
Computational Description: Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20730.1); Has 322 Blast hits to 322 proteins in 133 species: Archae - 0; Bacteria - 194; Metazoa - 18; Fungi - 2; Plants - 74; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20780.1

Model type: Protein coding
Short Description: senescence-associated E3 ubiquitin ligase 1
Curator Summary: Encodes a protein containing a U-box and an ARM domain.
Computational Description: senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20790.1

Model type: Protein coding
Short Description: F-box family protein
Computational Description: F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20795.1); Has 1819 Blast hits to 716 proteins in 166 species: Archae - 2; Bacteria - 445; Metazoa - 392; Fungi - 63; Plants - 395; Viruses - 75; Other Eukaryotes - 447 (source: NCBI BLink).
Link: InterPro Scan - TAIR