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15-4987-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11533494 [Map]; Strand: c
      • AT1G32060.1 - [+] show detail - phosphoribulokinase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-4987-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGA CTGAAGTCTA GTAAGTCTCT TACTCGCTCA 
    TCAAACCTTC ACAAGTAGAT AAATATTATT ATAAAATATT ACAAGTACCA 
    AAACTATAGA CTTAATTATT CGAATAAAAA TTAATCGGTG TCACACACTA 
    CATGCATAGA TTCAAAGATC CATCTTTAAT TATTCTGATA CTGATTCTAG 
    TATAAATCTA AGTCCAGATT CTTAATCATC CAAATTCCGA CAAGATAAGA 
    GACTTCCAAA CTCTAAAATT TGAGTATGTC TAAGATACAA AACAGAGTAT 
    CATAACAGAG TATGTGTAGC TTACATTGGG TGAAGACCTT CGATGACAAG 
    AATCTTAGGA GGCTGAATAA GCTCCGGAGG GTCAAGAAGT CCAGTGACAT 
    GGTTATAAAT CGGTTTCTCG ACGGCGATAC CATTCTTAAG AGCTTTGACT 
    TGCTCATACA TGAGATCAAA GTCATTGGCG CGTGGGTCCA AAGCGGTGAC 
    TTTCTGCTCT TTCCTACCGT ACCTATCCAA AGAATGGTAA TCATCAAGAC 
    AGATCACAGT GGTCGTGTCG CTGATGAGTG TGTTGGAATC AGGGTTCCCG 
    CCTTTTGGTG GCTTAGCAGC GCCACCAAAG ACGCTGGTGA GCCTCCGCAT 
    AAAGGTACTT TTGCCGCAGC CAGAGTCAGC AGCTAGTCCG ATCACGATGG 
    NTTCTTGTGC GCAAGTGATG A

AT1G32060.1

Model type
Protein coding
Short Description
phosphoribulokinase
Computational Description
phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink).
Link
InterPro Scan - TAIR