1. Home
  2. Mutant Lines
  3. 15-5023-1

15-5023-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7196097 [Map]; Strand: w
      • AT1G20730.1 - [+] show detail - Protein of unknown function (DUF833)
        Distance: 522; Region: intergenic
      • AT1G20735.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -1394; Region: intergenic
    Flanking Genome Sequence: 15-5023-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TCAACTTGTA TCACAAGAAA TCTCCTTTTC 
    TCTTTTAATT TGCTAAGCTA AGTCTTAAAT GATTTTACAT GTACACATAA 
    CTGATCATTA TGTACGAGAA AATCAAAACA GATCACCTAG CTACTAGTAT 
    CGGATTACCA AATCTAAGAC CAAATAATAT GTGGAGCCTG AATCTTAAAC 
    TTGTGTGCCA CTAGAAACCA CTTTTGTATA TTAATTTTTA GTTTAGTACA 
    AATATTTCTT AAGTGTTCTC CTTAATCAGC AAAAAGCTAG CGCAAAAGTT 
    GAACAGTCAA GAAAATAATG AAACTCCGTT TCTTCCATTT TACTTACTAT 
    AGAAAATTGT GCTAATAGAA GCCACTTTTT GTGGTTTAAC ATGTACATGA 
    ATCTGTAAAA GTAATAAATA TACACGGCTC CTGGTGGTTA CACGATGGAG 
    GAGAGAGTAA GATTTTTTAC CCTTTGACAA AAAAAAAAAA AAANNNTTTT 
    TACNANCCGG GGCNGTGANC CACCNGNCCN TTNAA

AT1G20730.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF833)
Computational Description
Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20740.1); Has 432 Blast hits to 427 proteins in 156 species: Archae - 0; Bacteria - 238; Metazoa - 13; Fungi - 0; Plants - 127; Viruses - 2; Other Eukaryotes - 52 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20735.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20940.1).
Link
InterPro Scan - TAIR