1. Home
  2. Mutant Lines
  3. 15-5523-1

15-5523-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7227740 [Map]; Strand: c
      • AT1G20795.1 - [+] show detail - F-box family protein
        Distance: -174; Region: promoter
    Flanking Genome Sequence: 15-5523-1 - 5-prime edge 
    TATNAAAGNN NTGAANNTTN NAGCANTTCC NANTTTGCCG TTTTCTATGN 
    CNGTCGGTAC GGGATTTTCC CNTNCTACTT TCATCCCTTT TTTTAGTCAA 
    GNGGAAGCGN NCATTTGAGT ATTGATCGGG CCTTGTCGAT TCGAAGATGT 
    TAGAANTACA AAAATATCTC ATGNNAGANA AAGCAAAACC CTAATCATTT 
    CCTGTATCAC TCTCTCCCTC TNCNTTTTTC CCCCCTAAGN CCATGNTGNA 
    AACATGGGGG GGGGGNCNCC CTNTCTAAAA AAAAATATTT TTTTTTTTTT 
    AAAAANANGG NNNGCCNNCN ACCCCNCCCC TNTNNGGGGG GCCCCCCCCN 
    NANNGGNGNC CCCCTNNNNN NNNAAAAAAA AAAAAANNNN NNNNGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7227767 [Map]; Strand: c
      • AT1G20795.1 - [+] show detail - F-box family protein
        Distance: -201; Region: promoter
    Flanking Genome Sequence: 15-5523-1 - 3-prime edge 
    ACTAAAAGCC CATCTCGAGT TTTTTTATGT GATTATTCGC TGTATATGTG 
    TATTTATCGA CGTAATTAAT TATTTTTAAC TAAAATAAAT CCAATAATGT 
    AAAGTTTGAA CGTTTGTTTT TGAAAAAATG GAATATCTCG AATGAATAAT 
    ATTTTTTCCT CTTTTTACAA AATGGCTATG TTTTCTGAAT CTATATATAG 
    TGATTACAAA ATGACTATGT TTTCTGAATC TATATATAGT GAGAAATCTT 
    TAGTATTAAC AATTGTCCCG TAGACTCATG ATATACTATT ACTTAATAAT 
    AGTTGTAAAC AATAAAATAT AAATATCTTA TAAATAGATA CAATTTACAA 
    ACTTTTGTAT ATACTAATTT TTAAAAATAA ATTATTTTAC GGTGTACGAA 
    TGACTAAAAT CTAGTACAGG GGTATAAATG TAGTATCTCT TGGAAAAAGG 
    AAATACTACA AACTGAAAAC GTTATAAAGT CATTCATTAA CATTTTAAAA 
    CTTAAAAAGA ATACTCTAAA TCTATAAATT CTTCCTATTT GCAAAATGTA 
    GCGATCCCGC AAGAGTGAGC AAACTCCAAA AACATGTCCT TAGTTCNGGA 
    TTCAGACTCT CGCTTGCATA AAGGCGGAAT TGCTAGTAAT CACCGGTCAT 
    CCGTACGGAG GTGAATT

AT1G20795.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20800.2); Has 127 Blast hits to 118 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR