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16-0253-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 17734822 [Map]; Strand: c
      • AT5G44070.1 - [+] show detail - phytochelatin synthase 1 (PCS1)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-0253-1 - 3-prime edge
    CACCGAAAGT TATTTTCGAA TCCACTAACG AATCTTCCAC AGCAAACACT 
    TTTGTGTTCC TCTGTAATTT CTCAGTATAT ATAGATACCA AAACAAGCAG
    TGAAAAATGG CTATGGCGAG TTTATATCGG CGATCTCTTC CTTCTCCTCC
    GGCCATTGAC TTTTCTTCCG CCGAAGGCAA GGTACGTACG GATC

AT5G44070.1

Model type
Protein coding
Short Description
phytochelatin synthase 1 (PCS1)
Curator Summary
Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+.
Computational Description
CADMIUM SENSITIVE 1 (CAD1); FUNCTIONS IN: cadmium ion binding, copper ion binding, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochelatin synthase, C-terminal (InterPro:IPR015407), Phytochelatin synthase (InterPro:IPR007719); BEST Arabidopsis thaliana protein match is: phytochelatin synthase 2 (TAIR:AT1G03980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR