1. Home
  2. Mutant Lines
  3. 16-0325-1

16-0325-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9631891 [Map]; Strand: w
      • AT1G27680.1 - [+] show detail - ADPGLC-PPase large subunit
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 16-0325-1 - 5-prime edge
    CATTTGTTGA TCAAGAGTCT CATGTAAGAA TATTTTACAC TTGCAATTCC 
    CAAACCAAAA AAGAAAAGAT TCTCTGTTTC CTTGGAAATG AATTGAAGTC
    CTTGGTTTAT TAGTTCTACT TTGTGCATTT GAGTCTGCCT AGCATCAATT
    CTGTGTGTCC ATGTTTGGTG GGAATTTGAT TTGGACTGTG TTGAAAATGA
    CTTCTTATGG TGGTAAGATG TTGCAACTGC TCAAAGTTTA GCTTTAGGTA
    TACTATAACT AGCCTAGGAC TTAATGTAGC AGATGGTAGC TATTGTGAGT
    TGGTTGAGCA GTTTAGTGAG GGCTGGCTAA TAAGGCTTTT AAGGTTTGGT
    TGGGCAGGAG AGTCTGTCAT CAATCAAAAT TTTCTGGTTT AGTGAATTGA
    AGCT

AT1G27680.1

Model type
Protein coding
Short Description
ADPGLC-PPase large subunit
Curator Summary
ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.
Computational Description
ADPGLC-PPase large subunit (APL2); CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT4G39210.1); Has 11860 Blast hits to 11712 proteins in 2161 species: Archae - 516; Bacteria - 8154; Metazoa - 62; Fungi - 36; Plants - 1704; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink).
Link
InterPro Scan - TAIR