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16-0871-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10179448 [Map]; Strand: w
      • AT1G29140.1 - [+] show detail - Pollen Ole e 1 allergen and extensin family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 16-0871-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCACACA 
    ATAACGTAAT TAGTTTTTCT TATAATCTTG CAACACTAAC TCTTAGAAAT 
    GTGACTAACC ACATTTTTAT AAAATTTTAA CATTGTTAAA AAGACGTCTA 
    TATATGCTTG TAATCATTTT TGTGAATTTT TACTACACAA TTCTAACCAT 
    TGACCTATAT ACCATAATGG GATCGATTTT TTATCAACCA ATATATTTTG 
    CTATTGACAG TATGCTCAAC AAATGAATTT GATTAGAGAA TGTGGTTAAT 
    TACCCTCGAG AAATTTGCTG ATACGGGTGA TGAATTGGAC ACGGCATGTG 
    TCGCAGTAAA CCGGANCCCT TGATTGNGGN ATTTTGNCAA AGNCGCCGGC 
    NTTACCTTGC GGNGNAANTG AACCAAGGGG NGGGGGAAAC CTTNGGGGCA 
    AAAGCCAGGG AAAAAAAAAN AAAAATTGGC CNNNNANCCC CCNAACCCTT 
    TTTTTTTTNG GGNTTTTNCN TNGGGNNNNN CCNNTNTGGN GGGNNCGGNN 
    GGGGGGGGGG GGGGCCCCCC CNCCCCCCCG AAAATTTTTA NNNTT

AT1G29140.1

Model type
Protein coding
Short Description
Pollen Ole e 1 allergen and extensin family protein
Computational Description
Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 312 Blast hits to 312 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 312; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR