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Mutant Lines
16-0905-1

16-0905-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24109290 [Map]; Strand: w
- AT5G59840.1 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: -39; Region: promoter

TTGTTGGTTA TAGTAAATGA GCAGAGAAGA AACGAGAGAG AGCGATGGAA 
ATGGCGGACG GCTAAAATAC GCCAGTCCTG ATTTAACTTC TCTTCTGGCC 
TCTTCTTCGC GTGCACNGAT ATTACCTGAA GCGTAAGTTA GCAAGATCAT 
AGTCCGATGG CCCAGAAAGA ATGAAGCCTT TTATTGGCCT TTCTTCTTTA 
ATGAGTCCTT GTGGGCCTTT TCTGATACGC TCGTAAATAT AAATCAATCT 
TATGGACTAA CCAGAAATAG ACACGTGGTA TGGATAGTTA TAGTTCCACA 
AAATGAAAGT CAAAAACTCA AATGTCACAC AAAGCATATA TGGAAAATAA 
ATGGCAACTT GGCTGAAGTA TATACATGCT TATAAGCTAC TCTTTGCCAA 
CAAATTCGCA ACAATGATTT CTAGAACTAT AATCAGTTGA TGGGGGAAGA 
AAATGTTGAA AGTTGTACAA TGAATCAAGT TAAAGTTAAA ATACTTTTTT 
CCCGATTCTC TGCAGGTTAC ATATATGTGT ATATACACAG TATGTGAATG 
ATCAAAAAGA AGATTTAATA TATCTAAGCA TGCAGACAAA AACCTATTGC 
TNAAAAGATT TCTAANAACC GGAGACCGTT TACCNAACAA AANATGAAGT 
TGAATTANNN NNCNNGGCNG NNNACCACCC NNCCCNNNNN NNNGGGGGGG 
GGGGGGTTNT TTCCCNNCC

3 prime edge [+] show sequence

Chromosome: 5; Position: 24109174 [Map]; Strand: w
- AT5G59840.1 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: 0; Region: intron1 (5UTR)

ACCAACAAGG TCTCTTCTCT TCTCTTCTCC TCTCTGCATC ATTTTGATCC 
GGTACGCATT CTTCGCTGAT TCCTTTAGGT TCTTCAATTT TCGATCTCTG 
TTGTCTTCAG ATGACACAAA GCAATTTGGT TTTTGATCTC TGAGTTTTTG 
TTTGTTTGTT TTCCTCATTT AGATTCGATG GCTGCTCCAC CTGCTAGAGC 
TAGAGCCGAT TATGATTATC TCATTAAGCT

AT5G59840.1

Model type: Protein coding
Short Description: Ras-related small GTP-binding family protein
Computational Description: Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A (TAIR:AT3G46060.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR